Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RPL23AP41-201ENST00000484754 458 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 RN7SL283P-201ENST00000489055 303 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC093278.1-201ENST00000494700 600 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 RNA5SP217-201ENST00000515959 91 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 Vault.3-201ENST00000516676 95 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC018630.1-201ENST00000541376 925 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 OR4H12P-201ENST00000556269 907 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC136619.2-201ENST00000563361 631 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 COX6CP3-201ENST00000580869 223 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 NRBF2P1-201ENST00000587407 859 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 KC877982.1-201ENST00000602313 470 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC006557.5-201ENST00000603126 811 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC245014.2-201ENST00000603689 287 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC010591.1-201ENST00000603941 649 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 RBM11P1-201ENST00000604951 799 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC246785.4-201ENST00000605374 287 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AL161734.1-201ENST00000609720 557 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 MIR6798-201ENST00000612887 67 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AC004696.1-201ENST00000614345 607 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 uc_338.12-201ENST00000616344 181 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AL133383.2-201ENST00000622958 2336 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 CR381653.2-201ENST00000624041 768 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 MAPK10-362ENST00000641864 4484 ntBASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRRTM1Q86UE6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 RNU5E-8P-201ENST00000363502 116 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 Y_RNA.381-201ENST00000365666 102 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 SNORA20.2-201ENST00000383922 131 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 RNU6-39P-201ENST00000384344 107 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 RN7SKP111-201ENST00000410349 271 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 RN7SKP263-201ENST00000411194 309 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 SDCBPP3-201ENST00000419629 891 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC099677.1-201ENST00000420575 175 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AL353193.1-201ENST00000421444 268 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 MTND4LP11-201ENST00000422184 280 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC133104.1-201ENST00000429100 218 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC073464.1-201ENST00000429823 534 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 RPL23AP30-201ENST00000432419 501 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 UBE2V1P8-201ENST00000437166 265 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 CST9LP2-201ENST00000437612 320 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 MTND1P12-201ENST00000455231 147 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC013267.1-201ENST00000458227 267 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 SNORD105B-201ENST00000458770 79 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 VN1R17P-201ENST00000472048 1090 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC103987.1-201ENST00000473394 348 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC126182.1-201ENST00000478134 357 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC093663.1-201ENST00000497190 394 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 HMGB3P15-201ENST00000507326 574 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 ARL4AP2-201ENST00000507378 601 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 SCARNA24.1-201ENST00000516465 137 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 DEFB108D-201ENST00000527787 222 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AP000857.1-201ENST00000532151 543 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 OR8R1P-201ENST00000543943 764 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 BNIP3P5-201ENST00000562290 498 ntBASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.88□□□□□ -1.95
LRRTM1Q86UE6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms