Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RPS15AP34-201ENST00000487776 387 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 RN7SL441P-201ENST00000492388 296 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC074250.1-201ENST00000511117 192 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 HIGD1AP3-201ENST00000515857 278 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 SNRPGP16-201ENST00000533275 226 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 SNORD91B-202ENST00000608459 222 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC021753.1-201ENST00000635724 168 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC104623.2-202ENST00000623477 4002 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 ZNF285B-201ENST00000561698 1767 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC009643.2-201ENST00000603543 1448 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AL450345.1-202ENST00000605741 3881 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 MIR411-201ENST00000362239 96 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RNA5SP191-201ENST00000362585 102 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-682P-201ENST00000363843 106 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RNA5SP479-201ENST00000364858 117 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 MIR521-1-201ENST00000384902 87 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RNA5SP332-201ENST00000391063 115 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 MIR1250-201ENST00000408098 113 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 COX6CP13-201ENST00000428703 226 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RPL7L1P1-201ENST00000448259 785 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AC073073.1-201ENST00000493920 463 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RPS27AP13-201ENST00000498403 237 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AC107393.1-201ENST00000512403 346 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-1278P-201ENST00000516130 107 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-914P-201ENST00000516749 109 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 RN7SKP277-201ENST00000516895 283 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AC024405.2-202ENST00000532731 184 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AC136624.4-201ENST00000573044 370 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AC005951.2-201ENST00000576282 495 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 MIR5096-201ENST00000583713 70 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AP001485.1-201ENST00000604799 199 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AL359893.1-201ENST00000447628 1580 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 LINC02555-201ENST00000563933 1951 ntBASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SH3RF1Q7Z6J0 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 RPL9P7-201ENST00000330965 580 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 RPS29P13-201ENST00000402041 169 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AC063979.1-201ENST00000415539 377 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 RPL35AP21-201ENST00000437667 333 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AC004938.1-201ENST00000438468 308 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AL513043.1-201ENST00000439124 535 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 MRPL48P1-201ENST00000445390 636 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 KNOP1P3-201ENST00000446933 426 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 U8.21-201ENST00000459536 136 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 RPL9P9-202ENST00000466501 579 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 MRPS33P2-201ENST00000507850 322 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AL359273.1-201ENST00000510918 627 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AC008716.1-201ENST00000511084 513 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 RN7SKP260-201ENST00000516907 149 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 SCARNA24.2-201ENST00000516968 130 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 TOMM20P2-201ENST00000540082 421 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 MIR4284-201ENST00000578924 81 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AC091042.1-201ENST00000579213 173 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 MIR1254-2-201ENST00000579553 63 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 AL450472.3-201ENST00000615578 367 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
SH3RF1Q7Z6J0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms