Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 RNU1-132P-201ENST00000364300 164 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 Y_RNA.231-201ENST00000364358 102 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 Y_RNA.263-201ENST00000364659 114 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 MIR192-201ENST00000384915 110 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AL606923.1-201ENST00000406616 190 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 MIR1251-201ENST00000408552 70 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC068533.1-201ENST00000418542 415 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 TOMM22P1-201ENST00000418578 312 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 KCTD9P3-201ENST00000434597 1169 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC024082.2-201ENST00000434771 238 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 HMGN2P26-201ENST00000463169 339 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 RPL29P14-201ENST00000495837 428 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC104806.1-201ENST00000508720 308 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 MTND3P22-201ENST00000510932 243 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-840P-201ENST00000517275 65 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC109635.4-202ENST00000531666 412 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC022655.2-201ENST00000577280 318 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC006116.10-201ENST00000591836 581 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AP000346.3-201ENST00000622821 210 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 MIR4275-201ENST00000636486 87 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 AC139713.2-214ENST00000642059 1811 ntBASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PTCHD4Q6ZW05 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RNU4-66P-201ENST00000365199 138 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 SNORA32.2-201ENST00000384049 122 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-38P-201ENST00000384085 107 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 MIR514A2-201ENST00000385131 88 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 MIR514A3-201ENST00000385132 88 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 EEF1A1P40-201ENST00000412883 573 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 OR6C66P-201ENST00000414917 930 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 MTCO1P39-201ENST00000426148 480 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 MTND4P28-201ENST00000426217 387 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 MTATP6P4-201ENST00000427725 675 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RPL26P6-201ENST00000440913 438 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RPL7P12-201ENST00000446719 750 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL500522.2-201ENST00000448562 343 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AMD1P1-201ENST00000457220 922 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-333P-201ENST00000459117 107 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RNU7-170P-201ENST00000459303 61 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 PPIAP15-201ENST00000479662 484 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RPL21P99-201ENST00000480369 423 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 IGKV2D-19-201ENST00000523346 262 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AC243972.3-201ENST00000539655 198 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AC078814.3-201ENST00000553036 491 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AC012182.1-201ENST00000570133 895 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL161729.3-201ENST00000603533 673 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-89P-201ENST00000606519 100 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 uc_338.11-201ENST00000619132 160 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 UBE3AP2-201ENST00000429033 2259 ntBASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PTCHD4Q6ZW05 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC092326.2-201ENST00000624772 1561 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 AC009812.4-201ENST00000569134 1805 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 RNU6-1287P-201ENST00000362914 107 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 Y_RNA.142-201ENST00000363491 102 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 Y_RNA.356-201ENST00000365475 113 ntBASIC3.68□□□□□ -1.82
PTCHD4Q6ZW05 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms