Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 CBX3P8-201ENST00000532412 525 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC233266.2-201ENST00000567067 528 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 RPS15AP11-201ENST00000594193 385 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC010200.2-201ENST00000605098 235 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 DUXAP9-208ENST00000622815 614 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 MIR6086-201ENST00000638065 55 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CSPG4Q6UVK1 SNORA6-201ENST00000384033 151 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 RNU4-72P-201ENST00000410754 173 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC241520.1-201ENST00000422654 1099 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 FTH1P12-201ENST00000432137 551 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AL353718.1-201ENST00000451028 517 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC023050.1-201ENST00000498198 304 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AP001180.3-201ENST00000582221 145 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 AC008083.4-201ENST00000615076 444 ntBASIC1□□□□□ -2.25
CSPG4Q6UVK1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1□□□□□ -2.25
CSPG4Q6UVK1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AL353898.1-201ENST00000444055 238 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 ARL2BPP4-201ENST00000506854 471 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC004241.3-201ENST00000611728 517 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC010487.4-201ENST00000637027 61 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AL354685.2-201ENST00000448218 1447 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 SNORA14A-201ENST00000364773 135 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 RNA5SP354-201ENST00000391247 136 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 FO393413.1-201ENST00000402892 195 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 RPL31P52-201ENST00000407532 367 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AL136380.1-201ENST00000447970 162 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC093801.2-201ENST00000503966 1050 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 AC130650.2-201ENST00000618736 2403 ntBASIC0.99□□□□□ -2.25
CSPG4Q6UVK1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 CYCSP48-201ENST00000417124 323 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 PSMA2P3-201ENST00000429685 675 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 HMGN2P21-201ENST00000447764 270 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 RNU6-347P-201ENST00000516658 105 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 MTCO1P47-201ENST00000523889 1271 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC007742.2-201ENST00000618226 398 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AL031601.2-202ENST00000622650 282 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC018630.2-201ENST00000534866 2403 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 CYCSP33-201ENST00000414485 327 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 RPS26P56-201ENST00000444468 240 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 RNU6-1218P-201ENST00000458990 108 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 RPL7P18-201ENST00000478965 734 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AC096586.2-201ENST00000610260 441 ntBASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
CSPG4Q6UVK1 AL359851.1-201ENST00000569460 4997 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 SNORD121B-201ENST00000458838 81 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC107032.1-201ENST00000485945 480 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC009220.3-201ENST00000604318 586 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 Y_RNA.60-201ENST00000362831 98 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AL591034.1-201ENST00000407447 340 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 SNORD23.1-201ENST00000408212 104 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 MIR1285-1-201ENST00000408593 84 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 SNRPEP10-201ENST00000420249 274 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC018630.2-202ENST00000422992 927 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 HMGN2P30-201ENST00000423237 256 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 MTATP6P4-201ENST00000427725 675 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 RPL30P6-201ENST00000475925 342 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AC087808.1-201ENST00000520501 361 ntBASIC0.97□□□□□ -2.25
CSPG4Q6UVK1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms