| CRTC3 | Q6UUV7 | AC007016.1-201 | ENST00000512110 | 244 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RRM2B-207 | ENST00000519962 | 201 nt | TSL 1 (best) BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AP001781.1-201 | ENST00000530977 | 207 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC026371.1-201 | ENST00000551867 | 419 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | MEG8-215 | ENST00000555354 | 469 nt | TSL 3 BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC008269.2-201 | ENST00000561915 | 1105 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC091043.1-201 | ENST00000579830 | 453 nt | TSL 3 BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | TTN-AS1-222 | ENST00000587576 | 399 nt | TSL 3 BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC131238.1-201 | ENST00000617135 | 328 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AL162373.1-201 | ENST00000620433 | 407 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Z69720.2-201 | ENST00000624755 | 279 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AGTR1-208 | ENST00000475347 | 1669 nt | APPRIS P1 TSL 3 BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | PPP1R9A-205 | ENST00000424654 | 4058 nt | TSL 5 BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC139769.1-204 | ENST00000472297 | 1931 nt | BASIC | 4.56 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | CDH8-205 | ENST00000577730 | 8009 nt | TSL 5 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | ASB5-201 | ENST00000296525 | 3031 nt | APPRIS P1 TSL 1 (best) BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | SKP1-209 | ENST00000522552 | 1683 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | SERPINA7-202 | ENST00000372563 | 1600 nt | APPRIS P1 TSL 5 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AL391684.1-202 | ENST00000641293 | 1636 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-490P-201 | ENST00000362985 | 107 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNA5SP28-201 | ENST00000363841 | 119 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Y_RNA.193-201 | ENST00000363979 | 102 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-214P-201 | ENST00000384130 | 107 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-45P-201 | ENST00000384471 | 107 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Y_RNA.557-201 | ENST00000384680 | 107 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-907P-201 | ENST00000390924 | 102 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNA5SP397-201 | ENST00000391323 | 118 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AL590704.1-201 | ENST00000402856 | 794 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | HDGFP1-201 | ENST00000405943 | 252 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RPS4XP7-201 | ENST00000406274 | 780 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-293P-201 | ENST00000411259 | 106 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RPL7AP73-201 | ENST00000413490 | 353 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC083867.1-201 | ENST00000413567 | 457 nt | TSL 3 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Z99755.1-201 | ENST00000414048 | 380 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | USMG5P1-201 | ENST00000425964 | 177 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AL591212.2-201 | ENST00000433923 | 257 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | MACC1-AS1-201 | ENST00000439285 | 639 nt | TSL 3 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC034195.1-202 | ENST00000451031 | 610 nt | TSL 3 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | MTATP8P1-201 | ENST00000467115 | 207 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RPL31P60-201 | ENST00000478450 | 367 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | ATP6V1G1P6-201 | ENST00000504007 | 334 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | LINC02230-201 | ENST00000511174 | 301 nt | TSL 5 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-470P-201 | ENST00000515954 | 104 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Y_RNA.661-201 | ENST00000516003 | 99 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RN7SKP92-201 | ENST00000517266 | 244 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC008694.2-201 | ENST00000517591 | 306 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC100871.2-201 | ENST00000522005 | 327 nt | TSL 3 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | TMCO5B-203 | ENST00000529623 | 509 nt | TSL 4 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC110588.1-201 | ENST00000559699 | 137 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC008745.1-201 | ENST00000604064 | 271 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | MIR4458HG-202 | ENST00000605918 | 1057 nt | TSL 1 (best) BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC006157.1-201 | ENST00000611750 | 366 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | U4.1-201 | ENST00000620349 | 87 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | HOXA11-AS1_4.1-201 | ENST00000620901 | 233 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC005086.4-201 | ENST00000623065 | 213 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | ARHGAP42-203 | ENST00000524892 | 5685 nt | TSL 5 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | SLC5A12-202 | ENST00000396005 | 6250 nt | APPRIS P1 TSL 1 (best) BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | STAG2-203 | ENST00000371145 | 4393 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | MFSD8-216 | ENST00000641147 | 4009 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | LINC02532-209 | ENST00000602934 | 2464 nt | TSL 2 BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | MAPK10-303 | ENST00000641324 | 3959 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC066616.2-201 | ENST00000559334 | 1481 nt | BASIC | 4.55 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | CHD9-221 | ENST00000615216 | 10603 nt | TSL 5 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | OR14L1P-202 | ENST00000641545 | 3009 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | THEMIS-204 | ENST00000537166 | 3830 nt | APPRIS ALT2 TSL 2 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | LINC02232-201 | ENST00000509932 | 4079 nt | TSL 1 (best) BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | ZNF780B-202 | ENST00000434248 | 8665 nt | APPRIS P1 TSL 5 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | ZNF780B-207 | ENST00000617676 | 8664 nt | APPRIS P1 TSL 5 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | UGT2A3-201 | ENST00000251566 | 2965 nt | APPRIS P1 TSL 1 (best) BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | CENPE-202 | ENST00000380026 | 8241 nt | TSL 1 (best) BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | F2RL2-201 | ENST00000296641 | 3429 nt | APPRIS P1 TSL 1 (best) BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | CNTN1-201 | ENST00000347616 | 5507 nt | APPRIS P1 TSL 1 (best) BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | POSTN-210 | ENST00000541481 | 3113 nt | TSL 1 (best) BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | UTP20-201 | ENST00000261637 | 9025 nt | APPRIS P1 TSL 1 (best) BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RAG2-209 | ENST00000618712 | 2818 nt | APPRIS P1 TSL 4 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC021146.4-201 | ENST00000309229 | 279 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNA5SP443-201 | ENST00000363083 | 132 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | SNORD113.2-201 | ENST00000364166 | 89 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-266P-201 | ENST00000364225 | 107 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU1-115P-201 | ENST00000365329 | 160 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Y_RNA.496-201 | ENST00000384444 | 101 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Y_RNA.527-201 | ENST00000384573 | 102 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-882P-201 | ENST00000391025 | 103 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | PPP3R1-202 | ENST00000409377 | 684 nt | TSL 3 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | Y_RNA.618-201 | ENST00000410949 | 107 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | HMGB3P2-201 | ENST00000411913 | 584 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC245028.1-201 | ENST00000423259 | 256 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC008267.5-201 | ENST00000424928 | 265 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RPS12P10-201 | ENST00000427031 | 377 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC007566.1-201 | ENST00000427458 | 643 nt | TSL 5 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | NOTCH2P1-201 | ENST00000443481 | 624 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AL354949.1-201 | ENST00000446438 | 170 nt | TSL 2 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RPS11P1-201 | ENST00000451072 | 473 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | GSTA11P-201 | ENST00000452866 | 669 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC004692.2-202 | ENST00000458680 | 478 nt | TSL 3 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | COX7A2-205 | ENST00000460985 | 357 nt | TSL 2 BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC128713.1-201 | ENST00000471495 | 306 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | AC116655.1-201 | ENST00000508324 | 901 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNA5SP360-201 | ENST00000516555 | 118 nt | BASIC | 4.54 | □□□□□ -1.68 | | |
| CRTC3 | Q6UUV7 | RNU6-840P-201 | ENST00000517275 | 65 nt | BASIC | 4.54 | □□□□□ -1.68 | | |