Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 AC006971.1-201ENST00000407916 4486 ntBASIC3.42□□□□□ -1.86
TMEM88Q6PEY1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM88Q6PEY1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TMEM88Q6PEY1 HSPA8P4-201ENST00000511877 1920 ntBASIC3.42□□□□□ -1.86
TMEM88Q6PEY1 CPHL1P-201ENST00000461341 3407 ntBASIC3.42□□□□□ -1.86
TMEM88Q6PEY1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 RNU5E-4P-201ENST00000364931 120 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 RNU1-82P-201ENST00000390851 165 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 SNORA74C-2-201ENST00000411179 201 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AL160275.3-201ENST00000423876 471 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 CALM2P2-201ENST00000428512 440 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AL590383.1-201ENST00000428602 75 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 NRBF2P3-201ENST00000432731 865 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 KCTD9P3-201ENST00000434597 1169 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 TAAR7P-201ENST00000436141 242 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 MTND3P10-201ENST00000450967 341 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 SCARNA18-201ENST00000459004 134 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC087588.1-201ENST00000462203 316 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 RPS20P22-201ENST00000473700 357 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 CCDC34P1-201ENST00000507441 517 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC108475.1-201ENST00000507880 950 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 RNA5SP290-201ENST00000517133 127 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 MTND4P7-201ENST00000523876 130 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 CENPUP1-201ENST00000526649 1202 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 BNIP3P6-201ENST00000549284 499 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC133555.2-201ENST00000550213 292 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC053481.4-201ENST00000583164 216 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 BNIP3P9-201ENST00000603714 553 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 RNU6-89P-201ENST00000606519 100 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 FAM27B-201ENST00000610601 213 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 DUSP12P1-201ENST00000612874 516 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AL110115.1-201ENST00000614396 364 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC007546.1-201ENST00000619452 559 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC006504.8-201ENST00000621046 635 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC090617.10-201ENST00000624308 134 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 AC244205.2-202ENST00000635781 342 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 MTND1P37-201ENST00000636562 264 ntBASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TMEM88Q6PEY1 ZNF285B-201ENST00000561698 1767 ntBASIC3.4□□□□□ -1.86
TMEM88Q6PEY1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.4□□□□□ -1.86
TMEM88Q6PEY1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TMEM88Q6PEY1 AL136164.4-201ENST00000625013 2135 ntBASIC3.4□□□□□ -1.86
TMEM88Q6PEY1 AC091152.2-201ENST00000591628 2569 ntBASIC3.4□□□□□ -1.86
TMEM88Q6PEY1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.231-201ENST00000364358 102 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 SNORA4.3-201ENST00000365564 137 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 HMGN2P8-201ENST00000391458 268 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 RPL32P23-201ENST00000397237 405 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 RNU6-373P-201ENST00000411247 98 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC114755.2-201ENST00000413520 361 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 RAD17P1-201ENST00000418130 2042 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AL160314.1-201ENST00000490836 438 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 MTCO2P30-201ENST00000503662 364 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 SUMO2P6-201ENST00000505273 288 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC114786.4-201ENST00000508771 728 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 RN7SKP13-201ENST00000515933 244 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 RNU6-507P-201ENST00000516045 100 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 SNORA20.3-201ENST00000516880 132 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 IGKV2-23-201ENST00000518729 323 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 CASP1P1-201ENST00000526345 212 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AL137161.1-201ENST00000532231 390 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC023050.3-201ENST00000541142 333 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AL118558.2-201ENST00000556294 238 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AL391358.1-201ENST00000605342 190 ntBASIC3.4□□□□□ -1.87
TMEM88Q6PEY1 AC064801.1-201ENST00000612025 407 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms