Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RNU6-528P-201ENST00000516926 100 ntBASIC2.74□□□□□ -1.97
ATL3Q6DD88 RNU6-714P-201ENST00000516963 103 ntBASIC2.74□□□□□ -1.97
ATL3Q6DD88 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.74□□□□□ -1.97
ATL3Q6DD88 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.74□□□□□ -1.97
ATL3Q6DD88 AP003497.1-201ENST00000528472 562 ntBASIC2.74□□□□□ -1.97
ATL3Q6DD88 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.74□□□□□ -1.97
ATL3Q6DD88 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.74□□□□□ -1.97
ATL3Q6DD88 AL137843.1-201ENST00000605078 385 ntBASIC2.74□□□□□ -1.97
ATL3Q6DD88 AC006270.3-201ENST00000605967 1036 ntBASIC2.74□□□□□ -1.97
ATL3Q6DD88 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.74□□□□□ -1.97
ATL3Q6DD88 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.74□□□□□ -1.97
ATL3Q6DD88 AL590099.1-201ENST00000615276 138 ntBASIC2.74□□□□□ -1.97
ATL3Q6DD88 AP001002.2-201ENST00000625137 386 ntBASIC2.74□□□□□ -1.97
ATL3Q6DD88 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATL3Q6DD88 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATL3Q6DD88 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATL3Q6DD88 RNU6-636P-201ENST00000384598 107 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC096664.2-201ENST00000411843 406 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 USP9YP10-201ENST00000454868 628 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 DUXAP8-207ENST00000456786 622 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 snoU13.8-201ENST00000458890 104 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 GTF2IP9-201ENST00000502460 301 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 RNU6-150P-201ENST00000516237 95 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 SCARNA15.2-201ENST00000516409 127 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 MTCO2P15-201ENST00000532655 656 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 OR6C7P-201ENST00000547875 934 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AL049838.1-201ENST00000563647 981 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC008739.2-201ENST00000597006 317 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 OR2AS2P-201ENST00000606902 342 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC024560.3-201ENST00000608482 349 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC245297.2-201ENST00000610119 565 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 SNHG22-203ENST00000617833 660 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AL159972.1-201ENST00000625150 448 ntBASIC2.73□□□□□ -1.97
ATL3Q6DD88 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.73□□□□□ -1.97
ATL3Q6DD88 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
ATL3Q6DD88 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 ZNF833P-201ENST00000424938 1494 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 RNU1-105P-201ENST00000363470 161 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 RNU6-198P-201ENST00000384258 104 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 MIR128-1-201ENST00000384921 82 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 SNORA48.2-201ENST00000390926 124 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 SPA17P1-201ENST00000416656 452 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 RPS25P9-201ENST00000435591 252 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 CYCSP32-201ENST00000440548 321 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 PTENP1-201ENST00000447117 1215 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 MTND1P9-201ENST00000453775 944 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 AP000852.1-201ENST00000472460 573 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 AC078814.3-201ENST00000553036 491 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 AC009712.1-201ENST00000564938 316 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.72□□□□□ -1.97
ATL3Q6DD88 VN1R90P-201ENST00000595717 726 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 AP001429.1-201ENST00000602568 530 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 FO624990.1-201ENST00000636373 85 ntBASIC2.72□□□□□ -1.97
ATL3Q6DD88 AC012321.1-201ENST00000561622 1588 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC062016.1-201ENST00000355719 319 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 RNU6-1035P-201ENST00000384477 107 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 TPMTP3-201ENST00000411928 735 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 USP9YP33-201ENST00000412220 421 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 PPP1R11P2-201ENST00000423543 382 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 BX119904.4-201ENST00000424402 301 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC091390.3-201ENST00000426478 338 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 TXNL1P1-201ENST00000429528 554 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 USP9YP35-201ENST00000435696 412 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.71□□□□□ -1.98
ATL3Q6DD88 RPL7P18-201ENST00000478965 734 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC108729.1-201ENST00000487812 947 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC026436.1-201ENST00000510537 270 ntBASIC2.71□□□□□ -1.98
ATL3Q6DD88 AC010587.2-201ENST00000511727 448 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms