Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL645568.3-201ENST00000433683 316 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AC079804.2-201ENST00000490376 200 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AL049838.1-201ENST00000563647 981 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 RNA5SP296-201ENST00000410523 111 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AKIRIN1P1-201ENST00000547384 544 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AC124283.4-201ENST00000581815 456 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
UBR4Q5T4S7 RNU6-733P-201ENST00000410759 104 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AL359851.1-201ENST00000569460 4997 ntBASIC0.75□□□□□ -2.29
UBR4Q5T4S7 AP000560.1-201ENST00000624150 1937 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC104986.1-201ENST00000517978 436 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC087465.1-201ENST00000560574 245 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 MIR3670-2-201ENST00000582974 65 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 MIR3670-1-201ENST00000584160 65 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 MIR3670-3-201ENST00000584855 65 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 SEPT7P9-203ENST00000604116 343 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC004832.4-201ENST00000608952 331 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 MIR3670-4-201ENST00000612260 65 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC012150.2-201ENST00000621300 544 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 LRRC77P-213ENST00000637727 880 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 NACAP2-201ENST00000318548 624 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 SNORA16.1-201ENST00000364597 132 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 Y_RNA.583-201ENST00000391033 113 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 RNA5SP105-201ENST00000391123 113 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 MIR1183-201ENST00000408856 89 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 RNU2-70P-201ENST00000410718 179 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AL606489.2-201ENST00000433886 234 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC048346.1-201ENST00000510247 144 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 LSM6P2-201ENST00000552208 177 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC004987.4-201ENST00000603383 338 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 RPS12P24-201ENST00000412619 387 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AL590556.1-201ENST00000423231 483 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC087241.2-201ENST00000535801 324 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 MIR4514-201ENST00000581410 57 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC106028.5-201ENST00000610332 395 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC0.74□□□□□ -2.29
UBR4Q5T4S7 AC099654.7-201ENST00000635788 2127 ntBASIC0.74□□□□□ -2.29
UBR4Q5T4S7 RNU6-461P-201ENST00000364195 107 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 RNU6-316P-201ENST00000391027 107 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 RBM43P1-201ENST00000476891 1081 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 MIR4448-201ENST00000584360 86 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 MTCO3P4-201ENST00000419236 787 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC012497.1-201ENST00000429392 575 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 GTF2IP9-201ENST00000502460 301 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AL050343.2-201ENST00000607338 280 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC073055.1-201ENST00000456901 1621 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 RPL17P12-201ENST00000413391 526 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 AC084851.1-201ENST00000529105 249 ntBASIC0.73□□□□□ -2.29
UBR4Q5T4S7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
UBR4Q5T4S7 NEK4P1-201ENST00000433383 879 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 GDI2P2-201ENST00000445131 608 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AC027673.1-201ENST00000456245 405 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 RPS15AP34-201ENST00000487776 387 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AGGF1P8-201ENST00000562979 1000 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 GTF2IP7-202ENST00000436677 309 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AL356473.1-201ENST00000406203 1408 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AL121578.1-201ENST00000428051 892 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 HMGN1P8-201ENST00000463578 288 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 RPS26P24-201ENST00000497656 331 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC0.72□□□□□ -2.29
UBR4Q5T4S7 AP001029.3-201ENST00000588063 596 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 Y_RNA.428-201ENST00000384078 102 ntBASIC0.72□□□□□ -2.29
UBR4Q5T4S7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms