| CDKL4 | Q5MAI5 | RNU7-193P-201 | ENST00000516723 | 65 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | SNORA31.22-201 | ENST00000517204 | 135 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | MIR100HG-213 | ENST00000531470 | 560 nt | TSL 4 BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | AC010186.2-204 | ENST00000537668 | 439 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | AL133166.1-201 | ENST00000551040 | 1034 nt | TSL 4 BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | CPSF6-207 | ENST00000551516 | 234 nt | TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | AC009117.2-201 | ENST00000565374 | 504 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | AC133065.1-201 | ENST00000572017 | 575 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | BNIP3P24-201 | ENST00000593398 | 557 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | AC100781.1-203 | ENST00000598549 | 399 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | APOOP1-201 | ENST00000604695 | 592 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | AP003400.5-201 | ENST00000624827 | 617 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | MIR219B-201 | ENST00000637023 | 88 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | PSMD5-AS1-215 | ENST00000640622 | 205 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CDKL4 | Q5MAI5 | SCOC-202 | ENST00000394201 | 1795 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | CENPCP1-201 | ENST00000533085 | 2578 nt | BASIC | 2.03 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | ZNF658B-202 | ENST00000615961 | 3375 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | MLIP-AS1-201 | ENST00000434196 | 1534 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | KLRC1-202 | ENST00000359151 | 1407 nt | APPRIS P4 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | KNL1-204 | ENST00000527044 | 5404 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | HTN3-201 | ENST00000381057 | 493 nt | APPRIS ALT2 TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | RNU6-883P-201 | ENST00000384597 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | SNORD65C-201 | ENST00000390962 | 71 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | SNORA46.1-201 | ENST00000391069 | 153 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | CYCSP48-201 | ENST00000417124 | 323 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | RPL7P36-201 | ENST00000444633 | 681 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | MTCO3P11-201 | ENST00000455103 | 774 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | GTF2IP12-201 | ENST00000456547 | 356 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC080013.2-201 | ENST00000460866 | 323 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | RPL21P47-201 | ENST00000483696 | 477 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL049874.1-201 | ENST00000489560 | 388 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | LINC02377-202 | ENST00000505436 | 523 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC022447.3-201 | ENST00000506865 | 495 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC017037.2-201 | ENST00000513850 | 890 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC119751.5-201 | ENST00000514077 | 770 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC022390.1-201 | ENST00000517854 | 434 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC104232.2-201 | ENST00000519680 | 769 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC025755.1-201 | ENST00000521306 | 278 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | DEUP1-203 | ENST00000527307 | 767 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL133370.1-201 | ENST00000554679 | 537 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL359238.1-201 | ENST00000557770 | 744 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC008543.4-201 | ENST00000585694 | 442 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | TCF4-AS2-201 | ENST00000586467 | 445 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC009314.1-201 | ENST00000603871 | 304 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC068313.1-201 | ENST00000604028 | 1008 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | VN1R74P-201 | ENST00000613259 | 503 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL162373.1-201 | ENST00000620433 | 407 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | MIR6873-201 | ENST00000622788 | 63 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC068057.2-201 | ENST00000624047 | 895 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC104820.1-201 | ENST00000624183 | 307 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC091932.3-201 | ENST00000624223 | 323 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AP000553.5-201 | ENST00000641933 | 54 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC004520.1-201 | ENST00000608362 | 1413 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | ASB17-201 | ENST00000284142 | 1107 nt | APPRIS P1 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | MDM2-207 | ENST00000360430 | 891 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | RNU6-839P-201 | ENST00000363347 | 108 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | TRDJ3-201 | ENST00000390476 | 59 nt | APPRIS P1 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC005062.1-204 | ENST00000415499 | 743 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AP000550.2-201 | ENST00000417463 | 774 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | FNDC1-IT1-201 | ENST00000419703 | 516 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | CR848007.2-201 | ENST00000424918 | 787 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | ZNF863P-201 | ENST00000426746 | 417 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AP000552.3-201 | ENST00000434730 | 775 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | CBWD4P-201 | ENST00000445695 | 655 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC055764.1-201 | ENST00000454526 | 473 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC092620.2-201 | ENST00000458007 | 744 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC072039.1-201 | ENST00000477611 | 581 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC074033.2-201 | ENST00000480669 | 535 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | LINC01995-201 | ENST00000489016 | 621 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC026801.1-201 | ENST00000497178 | 464 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC096577.1-203 | ENST00000506386 | 541 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | LINC02174-201 | ENST00000508977 | 553 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC010280.1-201 | ENST00000515199 | 340 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | IGKV3-31-201 | ENST00000523109 | 329 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | OR5AQ1P-201 | ENST00000527596 | 927 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | LINC02286-201 | ENST00000552425 | 285 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC087286.1-201 | ENST00000560712 | 568 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | LINC2194-202 | ENST00000567624 | 506 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC118755.1-201 | ENST00000572923 | 195 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC002984.1-201 | ENST00000591692 | 448 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | RNASEH2B-AS1-202 | ENST00000593369 | 648 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | SDR42E1P2-201 | ENST00000614861 | 481 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL590808.1-201 | ENST00000618696 | 141 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL445493.3-201 | ENST00000619568 | 477 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | SDR42E1P4-201 | ENST00000620894 | 481 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AC080188.3-201 | ENST00000624842 | 748 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | IGHVIII-44-202 | ENST00000636235 | 289 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | OR4G2P-202 | ENST00000641004 | 1759 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | OR1L1-201 | ENST00000309623 | 933 nt | APPRIS P1 BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | ZBTB8OS-202 | ENST00000373501 | 598 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | OR1L1-202 | ENST00000373686 | 1083 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | Y_RNA.500-201 | ENST00000384466 | 111 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | DEFB130A-201 | ENST00000400079 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | MIR888-201 | ENST00000401186 | 77 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | RNA5SP425-201 | ENST00000410336 | 112 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | RNU2-28P-201 | ENST00000410457 | 189 nt | BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | DEFB130B-201 | ENST00000437818 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL163192.1-201 | ENST00000448858 | 708 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| CDKL4 | Q5MAI5 | AL353691.1-201 | ENST00000451332 | 387 nt | BASIC | 2 | □□□□□ -2.09 | | |