Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SMC1AQ14683 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMC1AQ14683 RNU6-97P-201ENST00000363387 104 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 RNU6-343P-201ENST00000364709 104 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 SET-203ENST00000372688 801 ntTSL 2 BASIC3.13□□□□□ -1.91
SMC1AQ14683 RNU6-741P-201ENST00000383889 107 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 SNORA18.3-201ENST00000384122 132 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 ELOCP9-201ENST00000418624 239 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC1AQ14683 BX119904.4-201ENST00000424402 301 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC063976.3-201ENST00000426849 329 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.13□□□□□ -1.91
SMC1AQ14683 COX7BP2-201ENST00000437976 242 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 BNIP3P2-201ENST00000441221 577 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 RPL32P28-201ENST00000443577 397 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC1AQ14683 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.13□□□□□ -1.91
SMC1AQ14683 AP1S2P1-201ENST00000457344 379 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC1AQ14683 AC138853.1-201ENST00000503549 823 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC1AQ14683 AC098799.2-201ENST00000509466 868 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC1AQ14683 AC110760.3-202ENST00000515177 371 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.13□□□□□ -1.91
SMC1AQ14683 OR6C7P-201ENST00000547875 934 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.13□□□□□ -1.91
SMC1AQ14683 AC090616.3-201ENST00000582184 217 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 OR1M4P-201ENST00000589199 287 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC004987.4-201ENST00000603383 338 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC007619.2-201ENST00000605743 379 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC103710.4-201ENST00000609301 899 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 AC007318.2-201ENST00000620999 243 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.13□□□□□ -1.91
SMC1AQ14683 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
SMC1AQ14683 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMC1AQ14683 AC022336.2-201ENST00000568966 2538 ntBASIC3.13□□□□□ -1.91
SMC1AQ14683 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMC1AQ14683 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
SMC1AQ14683 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
SMC1AQ14683 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SMC1AQ14683 MIR181A2-201ENST00000384863 110 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 MIR513B-201ENST00000385136 84 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AL445529.1-201ENST00000398713 389 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 RPS4XP8-201ENST00000402039 771 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AC019097.1-201ENST00000424783 735 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 Z80107.1-201ENST00000436830 412 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 MTCO2P20-201ENST00000437339 673 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.12□□□□□ -1.91
SMC1AQ14683 CR769776.1-201ENST00000441254 787 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AC002381.1-201ENST00000447049 280 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AL109933.2-201ENST00000452651 260 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.12□□□□□ -1.91
SMC1AQ14683 RPL30P9-201ENST00000465586 330 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.12□□□□□ -1.91
SMC1AQ14683 AC108729.1-201ENST00000487812 947 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 RPPH1-2P-201ENST00000516688 293 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 RNA5SP291-201ENST00000517222 105 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.12□□□□□ -1.91
SMC1AQ14683 AP001372.4-201ENST00000524889 472 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.12□□□□□ -1.91
SMC1AQ14683 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.12□□□□□ -1.91
SMC1AQ14683 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMC1AQ14683 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.12□□□□□ -1.91
SMC1AQ14683 GLYCAM1-201ENST00000546596 285 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AC004486.1-201ENST00000546846 233 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.12□□□□□ -1.91
SMC1AQ14683 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC1AQ14683 MTND4P33-201ENST00000556706 766 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 TRAV28-201ENST00000557548 323 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
SMC1AQ14683 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC1AQ14683 AC007349.4-201ENST00000608114 532 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 AC079395.3-201ENST00000615161 484 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 IGHVIII-44-202ENST00000636235 289 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.12□□□□□ -1.91
SMC1AQ14683 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC1AQ14683 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SMC1AQ14683 RNU6-621P-201ENST00000364752 109 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 RNU6-637P-201ENST00000384050 107 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 RPL23AP29-201ENST00000397284 453 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC1AQ14683 AC092047.1-201ENST00000424997 240 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC1AQ14683 AC007919.1-201ENST00000429380 217 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.11□□□□□ -1.91
SMC1AQ14683 GTF2IP20-201ENST00000431663 360 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC1AQ14683 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC3.11□□□□□ -1.91
SMC1AQ14683 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC1AQ14683 PIGFP3-201ENST00000441918 722 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC108938.1-201ENST00000451204 136 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 RPS20P20-201ENST00000460498 340 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AC103975.1-201ENST00000482506 483 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 AIG1P1-201ENST00000503376 148 ntBASIC3.11□□□□□ -1.91
SMC1AQ14683 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.11□□□□□ -1.91
SMC1AQ14683 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms