Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AP003072.4-201ENST00000624580 310 ntBASIC1.95□□□□□ -2.1
HMGXB3Q12766 RNU6-1105P-201ENST00000384774 107 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 AL356057.2-201ENST00000403318 432 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 RNU2-71P-201ENST00000411395 189 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGXB3Q12766 HMGB3P3-201ENST00000510526 400 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.94□□□□□ -2.1
HMGXB3Q12766 AC087808.1-201ENST00000520501 361 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.94□□□□□ -2.1
HMGXB3Q12766 OR6C73P-201ENST00000546432 358 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 AC096586.2-201ENST00000610260 441 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 AC108706.1-201ENST00000611053 297 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HMGXB3Q12766 SGO1P2-201ENST00000429458 1589 ntBASIC1.94□□□□□ -2.1
HMGXB3Q12766 RNA5SP257-201ENST00000363023 116 ntBASIC1.93□□□□□ -2.1
HMGXB3Q12766 RNU6-1331P-201ENST00000363658 106 ntBASIC1.93□□□□□ -2.1
HMGXB3Q12766 U3.40-201ENST00000408706 208 ntBASIC1.93□□□□□ -2.1
HMGXB3Q12766 RN7SKP51-201ENST00000410781 304 ntBASIC1.93□□□□□ -2.1
HMGXB3Q12766 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGXB3Q12766 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGXB3Q12766 AC146507.1-201ENST00000468335 354 ntBASIC1.93□□□□□ -2.1
HMGXB3Q12766 MTATP6P22-201ENST00000507369 598 ntBASIC1.93□□□□□ -2.1
HMGXB3Q12766 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.93□□□□□ -2.1
HMGXB3Q12766 AC011472.4-201ENST00000615848 491 ntBASIC1.93□□□□□ -2.1
HMGXB3Q12766 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.93□□□□□ -2.1
HMGXB3Q12766 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HMGXB3Q12766 MIR532-201ENST00000385025 91 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 SSR1P1-201ENST00000407630 814 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.92□□□□□ -2.1
HMGXB3Q12766 AC074117.2-201ENST00000417130 397 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 AL590233.1-201ENST00000430017 456 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 MTCO2P32-201ENST00000514865 403 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 RNU6-711P-201ENST00000517255 106 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 CYP3A137P-201ENST00000562436 69 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 AC022079.2-201ENST00000619739 566 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 AC098657.3-201ENST00000620434 263 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 AC079597.1-201ENST00000624306 508 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 AP000676.4-201ENST00000624659 623 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 AL136520.1-201ENST00000600311 1322 ntBASIC1.92□□□□□ -2.1
HMGXB3Q12766 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HMGXB3Q12766 RNU6-600P-201ENST00000362524 99 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 RPL26P37-201ENST00000411983 438 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 CYCSP48-201ENST00000417124 323 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 Z75741.2-201ENST00000417272 1167 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGXB3Q12766 FTH1P12-201ENST00000432137 551 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 AC093852.1-201ENST00000503587 266 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HMGXB3Q12766 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.91□□□□□ -2.1
HMGXB3Q12766 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGXB3Q12766 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.91□□□□□ -2.1
HMGXB3Q12766 AC243773.3-201ENST00000613270 256 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 AL627230.5-201ENST00000619807 58 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGXB3Q12766 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGXB3Q12766 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HMGXB3Q12766 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HMGXB3Q12766 RNA5SP465-201ENST00000391195 109 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 IFNA20P-201ENST00000436840 528 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGXB3Q12766 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.91□□□□□ -2.1
HMGXB3Q12766 MIR4295-201ENST00000585286 85 ntBASIC1.91□□□□□ -2.1
HMGXB3Q12766 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
HMGXB3Q12766 CENPCP1-201ENST00000533085 2578 ntBASIC1.9□□□□□ -2.11
HMGXB3Q12766 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HMGXB3Q12766 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HMGXB3Q12766 AL136380.1-201ENST00000447970 162 ntBASIC1.9□□□□□ -2.11
HMGXB3Q12766 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.9□□□□□ -2.11
HMGXB3Q12766 RNU1-61P-201ENST00000516107 151 ntBASIC1.9□□□□□ -2.11
HMGXB3Q12766 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.9□□□□□ -2.11
HMGXB3Q12766 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
HMGXB3Q12766 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
HMGXB3Q12766 RNU4-38P-201ENST00000364472 129 ntBASIC1.89□□□□□ -2.11
HMGXB3Q12766 RNU6-1180P-201ENST00000364935 107 ntBASIC1.89□□□□□ -2.11
HMGXB3Q12766 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.89□□□□□ -2.11
HMGXB3Q12766 AL445305.1-201ENST00000432577 575 ntBASIC1.89□□□□□ -2.11
HMGXB3Q12766 THAP5P1-201ENST00000439089 262 ntBASIC1.89□□□□□ -2.11
HMGXB3Q12766 NF1P3-201ENST00000457709 450 ntBASIC1.89□□□□□ -2.11
HMGXB3Q12766 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGXB3Q12766 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.89□□□□□ -2.11
HMGXB3Q12766 DPRXP5-201ENST00000604662 539 ntBASIC1.89□□□□□ -2.11
HMGXB3Q12766 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HMGXB3Q12766 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMGXB3Q12766 SNORA7.2-201ENST00000364446 145 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HMGXB3Q12766 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.88□□□□□ -2.11
HMGXB3Q12766 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.88□□□□□ -2.11
HMGXB3Q12766 RBM43P1-201ENST00000476891 1081 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 NCOR1P1-202ENST00000486162 291 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 MRPL42P6-201ENST00000486397 371 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 MTCO1P47-201ENST00000523889 1271 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.88□□□□□ -2.11
HMGXB3Q12766 DNAJC8P1-201ENST00000554535 372 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 AL161912.3-201ENST00000605404 628 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 AC103810.8-201ENST00000607347 118 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 AL355816.1-201ENST00000607951 118 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 AC019131.2-201ENST00000609071 870 ntBASIC1.88□□□□□ -2.11
HMGXB3Q12766 RNF6P1-201ENST00000444889 1784 ntBASIC1.87□□□□□ -2.11
HMGXB3Q12766 SNORA62.1-201ENST00000364287 154 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms