Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.62□□□□□ -1.99
CKAP4Q07065 ATP5A1P2-202ENST00000616464 443 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CKAP4Q07065 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CKAP4Q07065 ZNF833P-201ENST00000424938 1494 ntBASIC2.62□□□□□ -1.99
CKAP4Q07065 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
CKAP4Q07065 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CKAP4Q07065 SNORD62.1-201ENST00000362541 86 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 RNU6-660P-201ENST00000364566 109 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.61□□□□□ -1.99
CKAP4Q07065 RNU6-730P-201ENST00000383954 104 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 RNU6-723P-201ENST00000383973 107 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 MIR9-1-201ENST00000385198 89 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 FAT1P1-201ENST00000406588 507 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 RPL7P30-201ENST00000420888 709 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.61□□□□□ -1.99
CKAP4Q07065 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.61□□□□□ -1.99
CKAP4Q07065 AL512649.1-201ENST00000428997 581 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 TAF9P1-201ENST00000445421 515 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.61□□□□□ -1.99
CKAP4Q07065 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 TAF9P2-201ENST00000454958 515 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.61□□□□□ -1.99
CKAP4Q07065 TPTE2P5-203ENST00000458118 728 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 RNU7-136P-201ENST00000458819 69 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.61□□□□□ -1.99
CKAP4Q07065 RAP1BP2-201ENST00000478270 544 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 RPL30P14-201ENST00000482744 348 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC082651.2-201ENST00000496833 166 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC080014.1-201ENST00000496877 1201 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 OR5H5P-201ENST00000503164 928 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.61□□□□□ -1.99
CKAP4Q07065 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.61□□□□□ -1.99
CKAP4Q07065 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.61□□□□□ -1.99
CKAP4Q07065 MTCYBP43-201ENST00000513621 740 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 SNORA31.8-201ENST00000516327 108 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
CKAP4Q07065 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 ACTR3BP3-201ENST00000565577 979 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.61□□□□□ -1.99
CKAP4Q07065 MTCYBP33-201ENST00000575007 1130 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.61□□□□□ -1.99
CKAP4Q07065 AP001981.2-201ENST00000603241 418 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 MTCYBP22-201ENST00000603788 447 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AL049779.4-201ENST00000604500 156 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC025588.4-201ENST00000615802 908 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC006927.3-201ENST00000638789 384 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 MTCO1P23-201ENST00000415223 1526 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC011460.1-201ENST00000636268 1834 ntBASIC2.61□□□□□ -1.99
CKAP4Q07065 AC090740.1-201ENST00000623193 2262 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CKAP4Q07065 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CKAP4Q07065 RNU6-989P-201ENST00000362756 107 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 RNU4-21P-201ENST00000362802 126 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 RNU6-1249P-201ENST00000363237 111 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 Y_RNA.201-201ENST00000364052 96 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 SNORD56.5-201ENST00000364281 72 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 RNU6-761P-201ENST00000384148 107 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 MT-TH-201ENST00000387441 69 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 SNORA26.8-201ENST00000391306 124 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 DHFRP6-201ENST00000401776 268 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 TPMTP3-201ENST00000411928 735 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 TPMTP2-201ENST00000414372 726 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AC016907.1-201ENST00000419483 435 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.6□□□□□ -1.99
CKAP4Q07065 LARP1BP3-201ENST00000437229 869 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.6□□□□□ -1.99
CKAP4Q07065 AL590664.1-201ENST00000448065 339 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 MTCO2P18-201ENST00000457151 658 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AL031183.1-201ENST00000457667 207 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 RPL30P9-201ENST00000465586 330 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 MTND4LP3-201ENST00000468320 276 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.6□□□□□ -1.99
CKAP4Q07065 AP002812.1-201ENST00000495378 474 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AC090453.1-201ENST00000495560 436 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 DSTNP2-201ENST00000504533 515 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AC107222.1-201ENST00000510899 637 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 RNU6-150P-201ENST00000516237 95 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.6□□□□□ -1.99
CKAP4Q07065 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.6□□□□□ -1.99
CKAP4Q07065 CYCSP39-201ENST00000565821 309 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 ROCK1P1-201ENST00000573767 549 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.6□□□□□ -1.99
CKAP4Q07065 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CKAP4Q07065 AC020895.1-201ENST00000595362 272 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 YPEL5P2-201ENST00000605553 359 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AC092354.1-201ENST00000606057 376 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AC080013.4-201ENST00000607624 649 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AC011939.3-201ENST00000613686 466 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AC009318.4-201ENST00000620496 486 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.6□□□□□ -1.99
CKAP4Q07065 AC092192.1-201ENST00000633154 1018 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 GDI2P1-201ENST00000429312 1336 ntBASIC2.6□□□□□ -1.99
CKAP4Q07065 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CKAP4Q07065 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CKAP4Q07065 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CKAP4Q07065 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.6□□□□□ -1.99
CKAP4Q07065 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.59□□□□□ -1.99
CKAP4Q07065 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms