Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-657P-201ENST00000383904 107 ntBASIC1.12□□□□□ -2.23
RPS28P62857 RNU1-73P-201ENST00000383971 164 ntBASIC1.12□□□□□ -2.23
RPS28P62857 SNORD116-23-201ENST00000384645 92 ntBASIC1.12□□□□□ -2.23
RPS28P62857 RNA5SP465-201ENST00000391195 109 ntBASIC1.12□□□□□ -2.23
RPS28P62857 RN7SKP159-201ENST00000410657 292 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 AC074117.2-201ENST00000417130 397 ntBASIC1.12□□□□□ -2.23
RPS28P62857 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 FAM204CP-201ENST00000424489 642 ntBASIC1.12□□□□□ -2.23
RPS28P62857 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 RPS15AP28-201ENST00000435088 386 ntBASIC1.12□□□□□ -2.23
RPS28P62857 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
RPS28P62857 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.12□□□□□ -2.23
RPS28P62857 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
RPS28P62857 RNA5SP34-201ENST00000516887 130 ntBASIC1.12□□□□□ -2.23
RPS28P62857 SNORA48.11-201ENST00000517015 89 ntBASIC1.12□□□□□ -2.23
RPS28P62857 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.12□□□□□ -2.23
RPS28P62857 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RPS28P62857 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC1.12□□□□□ -2.23
RPS28P62857 AC006199.1-201ENST00000548728 219 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 DUXAP1-201ENST00000556632 463 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AC106734.1-201ENST00000568646 663 ntBASIC1.12□□□□□ -2.23
RPS28P62857 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.12□□□□□ -2.23
RPS28P62857 AL357094.1-201ENST00000603845 844 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AC091152.3-201ENST00000604227 325 ntBASIC1.12□□□□□ -2.23
RPS28P62857 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 AC090912.3-201ENST00000609775 533 ntBASIC1.12□□□□□ -2.23
RPS28P62857 MIR7974-201ENST00000615835 79 ntBASIC1.12□□□□□ -2.23
RPS28P62857 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.12□□□□□ -2.23
RPS28P62857 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AL354798.1-201ENST00000622505 329 ntBASIC1.12□□□□□ -2.23
RPS28P62857 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
RPS28P62857 AC104820.1-201ENST00000624183 307 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AC087821.2-201ENST00000637086 450 ntBASIC1.12□□□□□ -2.23
RPS28P62857 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.12□□□□□ -2.23
RPS28P62857 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.11□□□□□ -2.23
RPS28P62857 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RPS28P62857 ZNF29P-201ENST00000225587 168 ntBASIC1.11□□□□□ -2.23
RPS28P62857 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RPS28P62857 RNU4-35P-201ENST00000362588 141 ntBASIC1.11□□□□□ -2.23
RPS28P62857 Y_RNA.67-201ENST00000362870 100 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AL022722.2-201ENST00000402519 180 ntBASIC1.11□□□□□ -2.23
RPS28P62857 NDUFB4P4-201ENST00000404822 243 ntBASIC1.11□□□□□ -2.23
RPS28P62857 BX323014.1-201ENST00000412876 237 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AC244453.4-201ENST00000419150 388 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AC246680.2-201ENST00000422106 389 ntBASIC1.11□□□□□ -2.23
RPS28P62857 PTGES3P4-201ENST00000426243 356 ntBASIC1.11□□□□□ -2.23
RPS28P62857 USP9YP9-201ENST00000429406 715 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AC244035.1-201ENST00000430042 390 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AC022018.1-201ENST00000430685 241 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC1.11□□□□□ -2.23
RPS28P62857 ZNF965P-201ENST00000432501 817 ntBASIC1.11□□□□□ -2.23
RPS28P62857 SNRPEP9-201ENST00000436794 238 ntBASIC1.11□□□□□ -2.23
RPS28P62857 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.11□□□□□ -2.23
RPS28P62857 RPL36AP15-201ENST00000444514 266 ntBASIC1.11□□□□□ -2.23
RPS28P62857 HMGN2P10-201ENST00000448085 265 ntBASIC1.11□□□□□ -2.23
RPS28P62857 USP9YP34-201ENST00000453983 808 ntBASIC1.11□□□□□ -2.23
RPS28P62857 RPS29P33-201ENST00000456717 146 ntBASIC1.11□□□□□ -2.23
RPS28P62857 RPL7P51-201ENST00000490532 749 ntBASIC1.11□□□□□ -2.23
RPS28P62857 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.11□□□□□ -2.23
RPS28P62857 AC010460.1-201ENST00000507087 466 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.11□□□□□ -2.23
RPS28P62857 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.11□□□□□ -2.23
RPS28P62857 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.11□□□□□ -2.23
RPS28P62857 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.11□□□□□ -2.23
RPS28P62857 ARL2BPP2-201ENST00000550907 489 ntBASIC1.11□□□□□ -2.23
RPS28P62857 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.11□□□□□ -2.23
RPS28P62857 AC090079.2-201ENST00000575289 768 ntBASIC1.11□□□□□ -2.23
RPS28P62857 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.11□□□□□ -2.23
RPS28P62857 AC007204.1-201ENST00000621794 555 ntBASIC1.11□□□□□ -2.23
RPS28P62857 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.11□□□□□ -2.23
RPS28P62857 AP003476.1-201ENST00000623984 516 ntBASIC1.11□□□□□ -2.23
RPS28P62857 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
RPS28P62857 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.11□□□□□ -2.23
RPS28P62857 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPS28P62857 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.1□□□□□ -2.23
RPS28P62857 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
RPS28P62857 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.1□□□□□ -2.23
RPS28P62857 AL359837.1-201ENST00000381357 287 ntBASIC1.1□□□□□ -2.23
RPS28P62857 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RPS28P62857 AC092642.1-201ENST00000392417 425 ntBASIC1.1□□□□□ -2.23
RPS28P62857 RPL26P27-201ENST00000414397 437 ntBASIC1.1□□□□□ -2.23
RPS28P62857 AC097463.2-201ENST00000421074 142 ntBASIC1.1□□□□□ -2.23
RPS28P62857 SKA2P1-201ENST00000425592 390 ntBASIC1.1□□□□□ -2.23
RPS28P62857 AC092017.2-201ENST00000427600 362 ntBASIC1.1□□□□□ -2.23
RPS28P62857 MTND2P5-201ENST00000432656 1006 ntBASIC1.1□□□□□ -2.23
RPS28P62857 USP9YP24-201ENST00000434374 697 ntBASIC1.1□□□□□ -2.23
RPS28P62857 PTGES3P1-201ENST00000439531 483 ntBASIC1.1□□□□□ -2.23
RPS28P62857 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.1□□□□□ -2.23
RPS28P62857 AC073387.1-201ENST00000453261 709 ntBASIC1.1□□□□□ -2.23
RPS28P62857 RN7SL863P-201ENST00000462370 296 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms