Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PEX3P56589 CCT4P2-201ENST00000233836 1548 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AC009902.3-201ENST00000606235 2172 ntBASIC2.98□□□□□ -1.93
PEX3P56589 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.98□□□□□ -1.93
PEX3P56589 RNU6-97P-201ENST00000363387 104 ntBASIC2.98□□□□□ -1.93
PEX3P56589 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
PEX3P56589 AL512633.1-201ENST00000399931 655 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AL356057.3-201ENST00000402607 340 ntBASIC2.98□□□□□ -1.93
PEX3P56589 RNU2-52P-201ENST00000410680 190 ntBASIC2.98□□□□□ -1.93
PEX3P56589 RNU6-920P-201ENST00000410926 92 ntBASIC2.98□□□□□ -1.93
PEX3P56589 TPMTP3-201ENST00000411928 735 ntBASIC2.98□□□□□ -1.93
PEX3P56589 RPS15AP38-201ENST00000413110 372 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.98□□□□□ -1.93
PEX3P56589 RPL21P66-201ENST00000426566 466 ntBASIC2.98□□□□□ -1.93
PEX3P56589 GDI2P2-201ENST00000445131 608 ntBASIC2.98□□□□□ -1.93
PEX3P56589 EPS15P1-201ENST00000448836 336 ntBASIC2.98□□□□□ -1.93
PEX3P56589 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.98□□□□□ -1.93
PEX3P56589 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.98□□□□□ -1.93
PEX3P56589 snoU13.4-201ENST00000458916 104 ntBASIC2.98□□□□□ -1.93
PEX3P56589 SNORD109B-201ENST00000458961 67 ntBASIC2.98□□□□□ -1.93
PEX3P56589 SNORD109A-201ENST00000459128 67 ntBASIC2.98□□□□□ -1.93
PEX3P56589 RPL21P104-201ENST00000464143 478 ntBASIC2.98□□□□□ -1.93
PEX3P56589 RPF2P2-201ENST00000504693 896 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.98□□□□□ -1.93
PEX3P56589 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.98□□□□□ -1.93
PEX3P56589 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.98□□□□□ -1.93
PEX3P56589 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.98□□□□□ -1.93
PEX3P56589 HMGB1P6-201ENST00000569046 646 ntBASIC2.98□□□□□ -1.93
PEX3P56589 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.98□□□□□ -1.93
PEX3P56589 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.98□□□□□ -1.93
PEX3P56589 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.98□□□□□ -1.93
PEX3P56589 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PEX3P56589 BNIP3P23-201ENST00000599655 511 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AL035413.2-201ENST00000604801 525 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AC103710.4-201ENST00000609301 899 ntBASIC2.98□□□□□ -1.93
PEX3P56589 TUG1_1.1-201ENST00000610654 145 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AC131902.3-201ENST00000611767 581 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AL355810.1-201ENST00000614629 552 ntBASIC2.98□□□□□ -1.93
PEX3P56589 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PEX3P56589 AC012150.2-201ENST00000621300 544 ntBASIC2.98□□□□□ -1.93
PEX3P56589 AF246928.1-201ENST00000623768 87 ntBASIC2.98□□□□□ -1.93
PEX3P56589 MIR6733-201ENST00000635723 61 ntBASIC2.98□□□□□ -1.93
PEX3P56589 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.98□□□□□ -1.93
PEX3P56589 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.98□□□□□ -1.93
PEX3P56589 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PEX3P56589 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PEX3P56589 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.97□□□□□ -1.93
PEX3P56589 RNU6-853P-201ENST00000364306 107 ntBASIC2.97□□□□□ -1.93
PEX3P56589 MIR9-1-201ENST00000385198 89 ntBASIC2.97□□□□□ -1.93
PEX3P56589 RPS3AP24-201ENST00000407896 734 ntBASIC2.97□□□□□ -1.93
PEX3P56589 RNU2-43P-201ENST00000410306 190 ntBASIC2.97□□□□□ -1.93
PEX3P56589 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.97□□□□□ -1.93
PEX3P56589 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.97□□□□□ -1.93
PEX3P56589 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PEX3P56589 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.97□□□□□ -1.93
PEX3P56589 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.97□□□□□ -1.93
PEX3P56589 RPS27AP14-201ENST00000422868 454 ntBASIC2.97□□□□□ -1.93
PEX3P56589 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.97□□□□□ -1.93
PEX3P56589 MTATP6P4-201ENST00000427725 675 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AL365184.2-201ENST00000431139 435 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.97□□□□□ -1.93
PEX3P56589 AL512286.1-201ENST00000439244 400 ntBASIC2.97□□□□□ -1.93
PEX3P56589 FAM103A2P-201ENST00000444122 354 ntBASIC2.97□□□□□ -1.93
PEX3P56589 ZNF114P1-201ENST00000453500 292 ntBASIC2.97□□□□□ -1.93
PEX3P56589 MTND1P9-201ENST00000453775 944 ntBASIC2.97□□□□□ -1.93
PEX3P56589 MTND3P7-201ENST00000474435 343 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC004924.1-201ENST00000480160 781 ntBASIC2.97□□□□□ -1.93
PEX3P56589 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.97□□□□□ -1.93
PEX3P56589 KLHL2P1-201ENST00000508691 521 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC022483.1-201ENST00000514020 567 ntBASIC2.97□□□□□ -1.93
PEX3P56589 MTND5P4-201ENST00000514978 288 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC106038.2-201ENST00000520706 568 ntBASIC2.97□□□□□ -1.93
PEX3P56589 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PEX3P56589 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.97□□□□□ -1.93
PEX3P56589 AP000857.1-201ENST00000532151 543 ntBASIC2.97□□□□□ -1.93
PEX3P56589 SNRPGP16-201ENST00000533275 226 ntBASIC2.97□□□□□ -1.93
PEX3P56589 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.97□□□□□ -1.93
PEX3P56589 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.97□□□□□ -1.93
PEX3P56589 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.97□□□□□ -1.93
PEX3P56589 MIR4319-201ENST00000577285 85 ntBASIC2.97□□□□□ -1.93
PEX3P56589 FAM60BP-201ENST00000578364 658 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AP001029.3-201ENST00000588063 596 ntBASIC2.97□□□□□ -1.93
PEX3P56589 BDH2P1-201ENST00000602288 736 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AL109653.1-201ENST00000603091 248 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AL022161.1-201ENST00000604390 213 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AL022099.1-201ENST00000604551 712 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC012443.1-201ENST00000605605 231 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC006023.2-201ENST00000609916 167 ntBASIC2.97□□□□□ -1.93
PEX3P56589 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC104010.1-201ENST00000616889 150 ntBASIC2.97□□□□□ -1.93
PEX3P56589 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PEX3P56589 AC091965.5-201ENST00000624785 342 ntBASIC2.97□□□□□ -1.93
PEX3P56589 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PEX3P56589 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PEX3P56589 AL445523.1-201ENST00000451184 1362 ntBASIC2.97□□□□□ -1.93
PEX3P56589 AC012321.1-201ENST00000561622 1588 ntBASIC2.96□□□□□ -1.94
PEX3P56589 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PEX3P56589 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PEX3P56589 RNU5F-6P-201ENST00000362979 116 ntBASIC2.96□□□□□ -1.94
PEX3P56589 Y_RNA.560-201ENST00000384689 102 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms