Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
HDAC4P56524 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HDAC4P56524 RNU6-432P-201ENST00000384196 109 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AL591034.1-201ENST00000407447 340 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 HMGN1P24-201ENST00000412282 298 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 C1DP2-201ENST00000418167 426 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AC012498.1-201ENST00000424037 437 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.62□□□□□ -1.83
HDAC4P56524 AC091286.1-201ENST00000431233 461 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.62□□□□□ -1.83
HDAC4P56524 HSPD1P21-201ENST00000436541 245 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.62□□□□□ -1.83
HDAC4P56524 AL357552.1-201ENST00000445254 415 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HDAC4P56524 MRPS31P2-201ENST00000451581 518 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AC105252.1-201ENST00000503089 286 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.62□□□□□ -1.83
HDAC4P56524 AC114967.1-201ENST00000504890 259 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 Y_RNA.672-201ENST00000516289 104 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.62□□□□□ -1.83
HDAC4P56524 AC245505.1-201ENST00000556398 224 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.62□□□□□ -1.83
HDAC4P56524 MED28P6-201ENST00000558776 231 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.62□□□□□ -1.83
HDAC4P56524 AC010546.1-201ENST00000569391 485 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 BDH2P1-201ENST00000602288 736 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AC025165.5-201ENST00000602802 578 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AC007038.2-201ENST00000608095 740 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 AL110115.1-201ENST00000614396 364 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HDAC4P56524 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.62□□□□□ -1.83
HDAC4P56524 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HDAC4P56524 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HDAC4P56524 TAB3P1-202ENST00000452645 1634 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
HDAC4P56524 MTND5P1-201ENST00000445440 1375 ntBASIC3.62□□□□□ -1.83
HDAC4P56524 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HDAC4P56524 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC4P56524 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 MTND5P27-201ENST00000428871 1720 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AL136164.4-201ENST00000625013 2135 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HDAC4P56524 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HDAC4P56524 RNU5E-1-201ENST00000362477 120 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC4P56524 RNU6-1215P-201ENST00000384441 102 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC4P56524 BX295541.1-201ENST00000417774 250 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AL158071.1-201ENST00000430315 461 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC104850.1-201ENST00000435940 476 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.61□□□□□ -1.83
HDAC4P56524 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC4P56524 RPL21P23-201ENST00000446654 460 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.61□□□□□ -1.83
HDAC4P56524 AC079448.1-201ENST00000449377 373 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 SSXP4-201ENST00000451349 245 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC006539.3-201ENST00000454258 129 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC108059.3-201ENST00000456388 214 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC091179.1-201ENST00000461606 579 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 RPL9P33-201ENST00000484311 566 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC006483.1-201ENST00000487308 313 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AL358832.1-201ENST00000497800 389 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 VN1R104P-201ENST00000505115 1009 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.61□□□□□ -1.83
HDAC4P56524 MTCO2P4-201ENST00000517968 247 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HDAC4P56524 AP000857.1-201ENST00000532151 543 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC4P56524 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC4P56524 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC4P56524 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.61□□□□□ -1.83
HDAC4P56524 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC4P56524 MIR3682-201ENST00000581338 84 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
HDAC4P56524 MIR5195-201ENST00000583555 115 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AL022154.1-201ENST00000604698 785 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 MIR7851-201ENST00000610611 160 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC090970.3-201ENST00000612566 866 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AL390240.1-201ENST00000612950 384 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AL450472.3-201ENST00000615578 367 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC026585.1-201ENST00000619582 524 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 AC243312.2-201ENST00000623340 601 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC4P56524 AC110994.2-201ENST00000635481 492 ntBASIC3.61□□□□□ -1.83
HDAC4P56524 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HDAC4P56524 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.61□□□□□ -1.83
HDAC4P56524 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HDAC4P56524 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.61□□□□□ -1.83
HDAC4P56524 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HDAC4P56524 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
HDAC4P56524 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HDAC4P56524 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.6□□□□□ -1.83
HDAC4P56524 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.6□□□□□ -1.83
HDAC4P56524 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms