Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC087588.1-201ENST00000462203 316 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RN7SL542P-201ENST00000467147 294 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH13P55290 AC092185.1-201ENST00000491371 97 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC093663.1-201ENST00000497190 394 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC091965.2-201ENST00000512324 613 ntBASIC3.17□□□□□ -1.9
CDH13P55290 MTND5P13-201ENST00000513046 1079 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC114797.1-201ENST00000514003 728 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RNA5SP217-201ENST00000515959 91 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RNU2-10P-201ENST00000516375 211 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RNA5SP291-201ENST00000517222 105 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RPL12P22-201ENST00000519073 490 ntBASIC3.17□□□□□ -1.9
CDH13P55290 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH13P55290 AC007458.1-201ENST00000542812 373 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH13P55290 AC128657.1-201ENST00000549459 145 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RPS3AP4-201ENST00000555161 764 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH13P55290 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH13P55290 AC002545.1-201ENST00000592511 181 ntBASIC3.17□□□□□ -1.9
CDH13P55290 HSPE1P7-201ENST00000604681 321 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AL451064.1-201ENST00000607718 471 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC103710.2-201ENST00000609912 942 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC004908.3-201ENST00000610248 625 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AC131902.3-201ENST00000611767 581 ntBASIC3.17□□□□□ -1.9
CDH13P55290 AP001506.1-201ENST00000615444 211 ntBASIC3.17□□□□□ -1.9
CDH13P55290 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH13P55290 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH13P55290 AL137003.2-201ENST00000606924 2538 ntBASIC3.17□□□□□ -1.9
CDH13P55290 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH13P55290 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH13P55290 RNU4-1-201ENST00000363925 141 ntBASIC3.16□□□□□ -1.9
CDH13P55290 SNORA40.3-201ENST00000390964 122 ntBASIC3.16□□□□□ -1.9
CDH13P55290 RPL23AP32-201ENST00000395315 459 ntBASIC3.16□□□□□ -1.9
CDH13P55290 RNU2-33P-201ENST00000410344 192 ntBASIC3.16□□□□□ -1.9
CDH13P55290 RN7SKP142-201ENST00000411236 328 ntBASIC3.16□□□□□ -1.9
CDH13P55290 SEPT2P1-201ENST00000419651 180 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC092047.1-201ENST00000424997 240 ntBASIC3.16□□□□□ -1.9
CDH13P55290 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL589872.1-201ENST00000426602 288 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC091286.1-201ENST00000431233 461 ntBASIC3.16□□□□□ -1.9
CDH13P55290 GOT2P5-201ENST00000433995 546 ntBASIC3.16□□□□□ -1.9
CDH13P55290 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.16□□□□□ -1.9
CDH13P55290 Z82210.1-201ENST00000440037 231 ntBASIC3.16□□□□□ -1.9
CDH13P55290 BNIP3P2-201ENST00000441221 577 ntBASIC3.16□□□□□ -1.9
CDH13P55290 USP9YP15-201ENST00000442391 422 ntBASIC3.16□□□□□ -1.9
CDH13P55290 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH13P55290 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 HMGN2P13-201ENST00000476476 274 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH13P55290 AC010587.1-201ENST00000505809 469 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC006445.2-201ENST00000510061 472 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 AC026403.1-201ENST00000518938 295 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC245166.1-201ENST00000521012 253 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH13P55290 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH13P55290 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH13P55290 AC034105.4-201ENST00000568304 277 ntBASIC3.16□□□□□ -1.9
CDH13P55290 MIR4276-201ENST00000584832 70 ntBASIC3.16□□□□□ -1.9
CDH13P55290 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH13P55290 AL670379.6-201ENST00000603753 252 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL670379.11-201ENST00000604059 253 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC008162.1-201ENST00000604718 254 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL670379.1-201ENST00000604752 252 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL670379.5-201ENST00000605253 252 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL670379.12-201ENST00000605291 253 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL670379.8-201ENST00000605353 252 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AL670379.7-201ENST00000605823 252 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC087752.4-201ENST00000605911 462 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC135507.1-201ENST00000607214 561 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC091304.9-201ENST00000612091 226 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC006338.1-201ENST00000618453 749 ntBASIC3.16□□□□□ -1.9
CDH13P55290 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH13P55290 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH13P55290 MTND1P37-201ENST00000636562 264 ntBASIC3.16□□□□□ -1.9
CDH13P55290 OR5H6-203ENST00000642105 978 ntBASIC3.16□□□□□ -1.9
CDH13P55290 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CDH13P55290 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.15□□□□□ -1.9
CDH13P55290 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH13P55290 GNG5P1-201ENST00000255500 204 ntBASIC3.15□□□□□ -1.91
CDH13P55290 SNORA62.3-201ENST00000365110 153 ntBASIC3.15□□□□□ -1.91
CDH13P55290 MIR490-201ENST00000384865 128 ntBASIC3.15□□□□□ -1.91
CDH13P55290 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH13P55290 RPS15AP12-201ENST00000419498 388 ntBASIC3.15□□□□□ -1.91
CDH13P55290 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
CDH13P55290 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH13P55290 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH13P55290 AC119618.1-201ENST00000434191 222 ntBASIC3.15□□□□□ -1.91
CDH13P55290 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH13P55290 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH13P55290 RBM43P1-201ENST00000476891 1081 ntBASIC3.15□□□□□ -1.91
CDH13P55290 MTND1P3-201ENST00000484956 952 ntBASIC3.15□□□□□ -1.91
CDH13P55290 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH13P55290 RPL21P13-201ENST00000488305 481 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms