Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.13□□□□□ -1.91
CDH11P55287 MED28P6-201ENST00000558776 231 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.13□□□□□ -1.91
CDH11P55287 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
CDH11P55287 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 AC006116.10-201ENST00000591836 581 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC080078.2-201ENST00000603766 501 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AL022154.1-201ENST00000604698 785 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC004067.1-201ENST00000608733 700 ntBASIC3.13□□□□□ -1.91
CDH11P55287 MIR7851-201ENST00000610611 160 ntBASIC3.13□□□□□ -1.91
CDH11P55287 AC090970.3-201ENST00000612566 866 ntBASIC3.13□□□□□ -1.91
CDH11P55287 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH11P55287 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH11P55287 AL136313.1-201ENST00000624804 202 ntBASIC3.13□□□□□ -1.91
CDH11P55287 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH11P55287 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH11P55287 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH11P55287 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH11P55287 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH11P55287 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH11P55287 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH11P55287 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH11P55287 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CDH11P55287 MFSD8-233ENST00000641482 4860 ntBASIC3.12□□□□□ -1.91
CDH11P55287 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH11P55287 OR1S2-201ENST00000302592 978 ntBASIC3.12□□□□□ -1.91
CDH11P55287 FRG1CP-201ENST00000358464 769 ntBASIC3.12□□□□□ -1.91
CDH11P55287 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CDH11P55287 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
CDH11P55287 RNU6-169P-201ENST00000365336 107 ntBASIC3.12□□□□□ -1.91
CDH11P55287 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH11P55287 MIR183-201ENST00000384958 110 ntBASIC3.12□□□□□ -1.91
CDH11P55287 MRPL42P2-201ENST00000403169 426 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AC126124.2-201ENST00000413542 321 ntBASIC3.12□□□□□ -1.91
CDH11P55287 PIGFP2-201ENST00000421400 651 ntBASIC3.12□□□□□ -1.91
CDH11P55287 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH11P55287 VDAC1P3-201ENST00000434069 851 ntBASIC3.12□□□□□ -1.91
CDH11P55287 SETP5-201ENST00000437270 562 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AC093156.1-201ENST00000440382 670 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH11P55287 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH11P55287 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH11P55287 AL358832.1-201ENST00000497800 389 ntBASIC3.12□□□□□ -1.91
CDH11P55287 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDH11P55287 AC004062.1-201ENST00000509926 645 ntBASIC3.12□□□□□ -1.91
CDH11P55287 RN7SKP13-201ENST00000515933 244 ntBASIC3.12□□□□□ -1.91
CDH11P55287 RNU6-1220P-201ENST00000517126 108 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH11P55287 AC022616.3-201ENST00000523940 148 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AP003072.2-201ENST00000527756 676 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AC103843.2-201ENST00000530523 682 ntBASIC3.12□□□□□ -1.91
CDH11P55287 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH11P55287 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH11P55287 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH11P55287 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH11P55287 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH11P55287 SNORD84-203ENST00000584275 78 ntBASIC3.12□□□□□ -1.91
CDH11P55287 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AC007179.3-201ENST00000604976 235 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AP000860.1-201ENST00000605250 559 ntBASIC3.12□□□□□ -1.91
CDH11P55287 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH11P55287 AC072046.2-201ENST00000618366 268 ntBASIC3.12□□□□□ -1.91
CDH11P55287 AC048347.1-201ENST00000624621 427 ntBASIC3.12□□□□□ -1.91
CDH11P55287 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH11P55287 DDX10P1-201ENST00000448545 1933 ntBASIC3.12□□□□□ -1.91
CDH11P55287 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH11P55287 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH11P55287 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH11P55287 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH11P55287 SRP72P2-201ENST00000344851 1979 ntBASIC3.11□□□□□ -1.91
CDH11P55287 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.11□□□□□ -1.91
CDH11P55287 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDH11P55287 RNU6-600P-201ENST00000362524 99 ntBASIC3.11□□□□□ -1.91
CDH11P55287 SNORA51.2-201ENST00000364595 132 ntBASIC3.11□□□□□ -1.91
CDH11P55287 RN7SKP226-201ENST00000364912 300 ntBASIC3.11□□□□□ -1.91
CDH11P55287 SNORA23-201ENST00000365128 182 ntBASIC3.11□□□□□ -1.91
CDH11P55287 RNU6-805P-201ENST00000365643 106 ntBASIC3.11□□□□□ -1.91
CDH11P55287 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH11P55287 RNU6-1042P-201ENST00000384204 107 ntBASIC3.11□□□□□ -1.91
CDH11P55287 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDH11P55287 HSPE1P26-201ENST00000405341 275 ntBASIC3.11□□□□□ -1.91
CDH11P55287 RNU2-8P-201ENST00000410727 190 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AL031779.1-201ENST00000415663 330 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AL356968.1-201ENST00000416622 474 ntBASIC3.11□□□□□ -1.91
CDH11P55287 MTCO1P21-201ENST00000416634 589 ntBASIC3.11□□□□□ -1.91
CDH11P55287 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH11P55287 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH11P55287 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CDH11P55287 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH11P55287 CYCSP4-201ENST00000429682 331 ntBASIC3.11□□□□□ -1.91
CDH11P55287 RPL23AP83-201ENST00000434984 473 ntBASIC3.11□□□□□ -1.91
CDH11P55287 MTND1P34-201ENST00000438556 671 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AL121871.1-201ENST00000443413 436 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH11P55287 ELOCP30-201ENST00000447108 299 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH11P55287 MLLT10P2-201ENST00000506434 249 ntBASIC3.11□□□□□ -1.91
CDH11P55287 AC108078.1-201ENST00000508073 725 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms