Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-289P-201ENST00000364093 107 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 Y_RNA.302-201ENST00000364997 102 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 RNU6-723P-201ENST00000383973 107 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 MIR592-201ENST00000384959 97 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AL354719.1-201ENST00000406535 843 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS2P54868 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.95□□□□□ -1.94
HMGCS2P54868 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS2P54868 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS2P54868 MTCO2P5-201ENST00000422621 426 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 RABEPKP1-201ENST00000440529 1026 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC002381.1-201ENST00000447049 280 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS2P54868 AL353691.1-201ENST00000451332 387 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.95□□□□□ -1.94
HMGCS2P54868 snoU109.4-201ENST00000458953 143 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS2P54868 AC005178.1-201ENST00000508392 440 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 SNORD59.2-201ENST00000516873 68 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS2P54868 OR4P1P-201ENST00000530808 1136 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS2P54868 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS2P54868 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.95□□□□□ -1.94
HMGCS2P54868 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC008088.1-201ENST00000580993 280 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC012669.1-201ENST00000603209 283 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC004987.4-201ENST00000603383 338 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC010738.1-201ENST00000604970 987 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC008962.1-201ENST00000605729 304 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AL355810.1-201ENST00000614629 552 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC092192.1-201ENST00000633154 1018 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.95□□□□□ -1.94
HMGCS2P54868 AC099063.3-201ENST00000642066 185 ntBASIC2.95□□□□□ -1.94
HMGCS2P54868 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.95□□□□□ -1.94
HMGCS2P54868 AL356473.1-201ENST00000406203 1408 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS2P54868 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS2P54868 RNU6-660P-201ENST00000364566 109 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGCS2P54868 RNU6-1074P-201ENST00000383995 104 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 RNY3P9-201ENST00000384727 106 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
HMGCS2P54868 MTATP6P27-201ENST00000416987 621 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC019178.2-201ENST00000423595 505 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC233728.2-201ENST00000425348 757 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS2P54868 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGCS2P54868 RPL36AP33-201ENST00000450395 310 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 CACYBPP2-201ENST00000453625 678 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS2P54868 snoU13.26-201ENST00000459452 105 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 RPL30P9-201ENST00000465586 330 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 BZW1P2-201ENST00000473537 826 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC023424.2-201ENST00000493479 777 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 RPS29P21-201ENST00000496272 170 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AP001804.3-201ENST00000525146 880 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC022690.1-201ENST00000526681 550 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC018630.1-201ENST00000541376 925 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AC126177.3-201ENST00000551839 688 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AC055876.5-201ENST00000605667 259 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 RNU6-88P-201ENST00000606801 100 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AL596245.1-201ENST00000618994 362 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.94□□□□□ -1.94
HMGCS2P54868 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
HMGCS2P54868 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.94□□□□□ -1.94
HMGCS2P54868 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
HMGCS2P54868 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
HMGCS2P54868 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.93□□□□□ -1.94
HMGCS2P54868 RNU6-253P-201ENST00000384730 105 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 RNU6-1077P-201ENST00000410506 102 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HMGCS2P54868 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS2P54868 AC009518.2-201ENST00000418056 731 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC083875.1-201ENST00000419509 405 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGCS2P54868 AL445669.1-201ENST00000426743 755 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.93□□□□□ -1.94
HMGCS2P54868 LSM1P1-201ENST00000438629 273 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.93□□□□□ -1.94
HMGCS2P54868 TRIM60P18-201ENST00000441518 828 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 FDX1P2-201ENST00000450769 375 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 RPL30P6-201ENST00000475925 342 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 BET1P1-201ENST00000482276 359 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.93□□□□□ -1.94
HMGCS2P54868 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 RN7SL636P-201ENST00000497504 294 ntBASIC2.93□□□□□ -1.94
HMGCS2P54868 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms