Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL096829.2-201ENST00000446582 742 ntBASIC1.54□□□□□ -2.16
RPL28P46779 MTATP6P7-201ENST00000453315 681 ntBASIC1.54□□□□□ -2.16
RPL28P46779 RPS20P20-201ENST00000460498 340 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AC097493.1-201ENST00000463958 372 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AC105252.1-201ENST00000503089 286 ntBASIC1.54□□□□□ -2.16
RPL28P46779 COL6A4P2-205ENST00000509855 506 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AC098591.2-201ENST00000510152 315 ntBASIC1.54□□□□□ -2.16
RPL28P46779 XKRY-201ENST00000510392 1100 ntBASIC1.54□□□□□ -2.16
RPL28P46779 RN7SKP24-201ENST00000515888 284 ntBASIC1.54□□□□□ -2.16
RPL28P46779 NRON-201ENST00000517270 370 ntBASIC1.54□□□□□ -2.16
RPL28P46779 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.54□□□□□ -2.16
RPL28P46779 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.54□□□□□ -2.16
RPL28P46779 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.54□□□□□ -2.16
RPL28P46779 EIF4BP1-201ENST00000554881 351 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AL359212.1-201ENST00000556608 614 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.54□□□□□ -2.16
RPL28P46779 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.54□□□□□ -2.16
RPL28P46779 AC005951.2-201ENST00000576282 495 ntBASIC1.54□□□□□ -2.16
RPL28P46779 MIR4319-201ENST00000577285 85 ntBASIC1.54□□□□□ -2.16
RPL28P46779 SNORD53-201ENST00000579969 78 ntBASIC1.54□□□□□ -2.16
RPL28P46779 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AC061975.8-201ENST00000587058 721 ntBASIC1.54□□□□□ -2.16
RPL28P46779 MTND4LP5-201ENST00000605152 292 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AL390208.1-201ENST00000605885 644 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AL589743.7-201ENST00000612637 233 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AC012640.5-201ENST00000623897 319 ntBASIC1.54□□□□□ -2.16
RPL28P46779 AC120349.2-201ENST00000625002 298 ntBASIC1.54□□□□□ -2.16
RPL28P46779 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.54□□□□□ -2.16
RPL28P46779 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
RPL28P46779 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPL28P46779 SNORD65.1-201ENST00000390889 71 ntBASIC1.53□□□□□ -2.16
RPL28P46779 MCTS2P-201ENST00000394552 546 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AL356473.1-201ENST00000406203 1408 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC096649.2-201ENST00000416186 393 ntBASIC1.53□□□□□ -2.16
RPL28P46779 OR4K6P-201ENST00000416478 897 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 MTCO2P5-201ENST00000422621 426 ntBASIC1.53□□□□□ -2.16
RPL28P46779 NUP35P1-201ENST00000422734 947 ntBASIC1.53□□□□□ -2.16
RPL28P46779 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 DPRXP1-201ENST00000426312 460 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC007560.1-201ENST00000426912 237 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC092634.2-201ENST00000428146 1010 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.53□□□□□ -2.16
RPL28P46779 SRIP2-201ENST00000428470 166 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 MOB1AP2-201ENST00000446060 614 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RPL28P46779 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.53□□□□□ -2.16
RPL28P46779 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.53□□□□□ -2.16
RPL28P46779 RPL26P9-201ENST00000457466 433 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 SNORD121B-201ENST00000458838 81 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC004263.1-201ENST00000479327 332 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.53□□□□□ -2.16
RPL28P46779 AC096576.1-201ENST00000489014 359 ntBASIC1.53□□□□□ -2.16
RPL28P46779 RPS29P20-201ENST00000489592 171 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC023141.11-201ENST00000508864 202 ntBASIC1.53□□□□□ -2.16
RPL28P46779 RNA5SP356-201ENST00000515972 94 ntBASIC1.53□□□□□ -2.16
RPL28P46779 RNA5SP291-201ENST00000517222 105 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 AP005902.1-201ENST00000521358 186 ntBASIC1.53□□□□□ -2.16
RPL28P46779 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.53□□□□□ -2.16
RPL28P46779 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RPL28P46779 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
RPL28P46779 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.53□□□□□ -2.16
RPL28P46779 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.53□□□□□ -2.16
RPL28P46779 AC105137.2-201ENST00000569073 466 ntBASIC1.53□□□□□ -2.16
RPL28P46779 MIR5571-201ENST00000577998 113 ntBASIC1.53□□□□□ -2.16
RPL28P46779 MTND4P35-201ENST00000604257 1375 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC007621.1-201ENST00000604544 437 ntBASIC1.53□□□□□ -2.16
RPL28P46779 AC009090.3-201ENST00000616553 565 ntBASIC1.53□□□□□ -2.16
RPL28P46779 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.53□□□□□ -2.16
RPL28P46779 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.53□□□□□ -2.16
RPL28P46779 ZNF658B-202ENST00000615961 3375 ntBASIC1.53□□□□□ -2.17
RPL28P46779 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RPL28P46779 Z99496.1-201ENST00000469424 1477 ntBASIC1.52□□□□□ -2.17
RPL28P46779 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RPL28P46779 FAM133CP-201ENST00000332869 704 ntBASIC1.52□□□□□ -2.17
RPL28P46779 HSPE1P11-201ENST00000339579 310 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC062016.1-201ENST00000355719 319 ntBASIC1.52□□□□□ -2.17
RPL28P46779 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.52□□□□□ -2.17
RPL28P46779 SNORA80A-201ENST00000363922 136 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
RPL28P46779 RNU6-1083P-201ENST00000384022 107 ntBASIC1.52□□□□□ -2.17
RPL28P46779 SNORA6-201ENST00000384033 151 ntBASIC1.52□□□□□ -2.17
RPL28P46779 PTGES3P2-201ENST00000407942 482 ntBASIC1.52□□□□□ -2.17
RPL28P46779 RNU2-52P-201ENST00000410680 190 ntBASIC1.52□□□□□ -2.17
RPL28P46779 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RPL28P46779 AL109913.1-201ENST00000421173 514 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AL139421.1-201ENST00000423010 169 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC007919.1-201ENST00000429380 217 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AC236972.1-201ENST00000433225 199 ntBASIC1.52□□□□□ -2.17
RPL28P46779 SEPT7P5-201ENST00000434048 306 ntBASIC1.52□□□□□ -2.17
RPL28P46779 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.52□□□□□ -2.17
RPL28P46779 MTND4P15-201ENST00000437913 1033 ntBASIC1.52□□□□□ -2.17
RPL28P46779 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.52□□□□□ -2.17
RPL28P46779 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms