Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC091516.1-201ENST00000549191 703 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 AC004817.2-201ENST00000561794 651 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.05□□□□□ -1.6
PDE6BP35913 AP001029.3-201ENST00000588063 596 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 AL669831.4-202ENST00000590817 238 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.05□□□□□ -1.6
PDE6BP35913 AC007938.3-201ENST00000604965 623 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 AP000654.2-201ENST00000605633 586 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 AL022345.1-201ENST00000607292 135 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 AC096577.2-201ENST00000611455 153 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 AL357559.1-201ENST00000622228 274 ntBASIC5.05□□□□□ -1.6
PDE6BP35913 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.05□□□□□ -1.6
PDE6BP35913 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PDE6BP35913 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDE6BP35913 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDE6BP35913 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDE6BP35913 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.05□□□□□ -1.6
PDE6BP35913 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 AL359893.1-201ENST00000447628 1580 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
PDE6BP35913 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 AC092435.4-201ENST00000623012 4159 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 OR1S2-201ENST00000302592 978 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 Y_RNA.28-201ENST00000362554 111 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 SNORA5A-201ENST00000384111 134 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 U8.11-201ENST00000384699 133 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 U8.12-201ENST00000384701 133 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDE6BP35913 AL031679.1-201ENST00000400616 525 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 MIR548F4-201ENST00000408515 105 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 RNU6-193P-201ENST00000410977 107 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.04□□□□□ -1.6
PDE6BP35913 AC119618.1-201ENST00000434191 222 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.04□□□□□ -1.6
PDE6BP35913 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.04□□□□□ -1.6
PDE6BP35913 DDX3P2-201ENST00000446138 111 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 RPS11P1-201ENST00000451072 473 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 RPL36AP13-201ENST00000457490 317 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 U8.18-201ENST00000459285 133 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 MTCO1P29-201ENST00000496868 288 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AC021146.3-201ENST00000511911 260 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 SNORD27.1-201ENST00000516319 72 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 RPL7P20-201ENST00000520308 745 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 APOOP3-201ENST00000536787 586 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.04□□□□□ -1.6
PDE6BP35913 SNRPGP18-201ENST00000553000 214 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.04□□□□□ -1.6
PDE6BP35913 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.04□□□□□ -1.6
PDE6BP35913 AC025627.2-201ENST00000576220 160 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.04□□□□□ -1.6
PDE6BP35913 uc_338.15-201ENST00000615470 191 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AC244517.12-201ENST00000623581 663 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 AC119674.1-207ENST00000641355 633 ntBASIC5.04□□□□□ -1.6
PDE6BP35913 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PDE6BP35913 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDE6BP35913 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.04□□□□□ -1.6
PDE6BP35913 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDE6BP35913 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDE6BP35913 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.03□□□□□ -1.6
PDE6BP35913 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.03□□□□□ -1.6
PDE6BP35913 MTND4P1-201ENST00000457501 1466 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 Y_RNA.100-201ENST00000363141 102 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 U3.12-201ENST00000364498 214 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 RNU6-38P-201ENST00000384085 107 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 SNORA51.6-201ENST00000384151 125 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 MIR124-3-201ENST00000384866 87 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.03□□□□□ -1.6
PDE6BP35913 RPL7L1P10-201ENST00000427790 463 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.03□□□□□ -1.6
PDE6BP35913 AL358472.1-201ENST00000431295 329 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 AC079781.2-201ENST00000446424 169 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 ABCF2P2-201ENST00000450549 296 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 RNU6-333P-201ENST00000459117 107 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 RNU7-66P-201ENST00000459469 62 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 AC104563.1-201ENST00000476147 376 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 AC004062.1-201ENST00000509926 645 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.03□□□□□ -1.6
PDE6BP35913 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.03□□□□□ -1.6
PDE6BP35913 RNU4-29P-201ENST00000515943 174 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 AP001804.3-201ENST00000525146 880 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.03□□□□□ -1.6
PDE6BP35913 AL353997.4-201ENST00000586196 166 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDE6BP35913 AC006065.5-201ENST00000623427 349 ntBASIC5.03□□□□□ -1.6
PDE6BP35913 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.03□□□□□ -1.6
PDE6BP35913 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.03□□□□□ -1.6
PDE6BP35913 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDE6BP35913 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.03□□□□□ -1.6
PDE6BP35913 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.02□□□□□ -1.61
PDE6BP35913 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDE6BP35913 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDE6BP35913 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.02□□□□□ -1.61
PDE6BP35913 U3.15-201ENST00000365398 212 ntBASIC5.02□□□□□ -1.61
PDE6BP35913 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms