Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A5P29400 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A5P29400 SNRPGP16-201ENST00000533275 226 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AL137100.2-201ENST00000555786 315 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A5P29400 AC095057.3-201ENST00000567102 1157 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A5P29400 AC135178.6-201ENST00000605314 398 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 MIR1264-201ENST00000616374 69 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AL133216.2-202ENST00000634512 349 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A5P29400 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A5P29400 OR4G11P-202ENST00000642116 1414 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 MTND4P1-201ENST00000457501 1466 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 RNU6-1151P-201ENST00000384684 107 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A5P29400 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A5P29400 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC016065.2-201ENST00000514530 444 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A5P29400 AC139103.1-201ENST00000534696 1030 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.77□□□□□ -2.13
COL4A5P29400 MIR4285-201ENST00000581001 85 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC012254.4-201ENST00000588843 273 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 XIAPP1-201ENST00000603162 600 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A5P29400 AC018755.4-201ENST00000619715 454 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC090740.1-201ENST00000623193 2262 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 AC016716.1-201ENST00000265882 708 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 SSXP10-201ENST00000402595 565 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 UBE2V1P11-201ENST00000411559 285 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 TPMTP3-201ENST00000411928 735 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 HMGB3P31-201ENST00000413333 595 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A5P29400 KATNBL1P3-201ENST00000443475 909 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A5P29400 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A5P29400 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
COL4A5P29400 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A5P29400 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A5P29400 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.76□□□□□ -2.13
COL4A5P29400 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A5P29400 RPL21P5-201ENST00000554662 472 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 TRAV28-201ENST00000557548 323 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 AC106791.2-201ENST00000604680 391 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 AC079791.1-201ENST00000605356 973 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A5P29400 AC007275.1-201ENST00000621243 671 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 AP003400.6-201ENST00000624698 740 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.76□□□□□ -2.13
COL4A5P29400 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
COL4A5P29400 SGO1P2-201ENST00000429458 1589 ntBASIC1.76□□□□□ -2.13
COL4A5P29400 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL4A5P29400 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL4A5P29400 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
COL4A5P29400 SNORA1.3-201ENST00000384676 136 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 SSXP9-201ENST00000417503 292 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 TMEM167AP1-201ENST00000423409 219 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 FABP5P3-201ENST00000437960 408 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A5P29400 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.75□□□□□ -2.13
COL4A5P29400 RNU6-1223P-201ENST00000517124 104 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.75□□□□□ -2.13
COL4A5P29400 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.75□□□□□ -2.13
COL4A5P29400 AC021851.1-201ENST00000608537 1082 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 uc_338.12-201ENST00000616344 181 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 AC073569.3-201ENST00000619055 682 ntBASIC1.75□□□□□ -2.13
COL4A5P29400 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
COL4A5P29400 MTND5P31-201ENST00000419366 1374 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 SNORA14A-201ENST00000364773 135 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AL136133.1-201ENST00000413694 376 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 DPPA3P1-201ENST00000448050 469 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AC004223.1-201ENST00000479840 271 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 MTCO3P44-201ENST00000510977 541 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A5P29400 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.74□□□□□ -2.13
COL4A5P29400 MIR3660-201ENST00000584845 100 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 AC008083.4-201ENST00000615076 444 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AL161629.2-201ENST00000615347 275 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.74□□□□□ -2.13
COL4A5P29400 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
COL4A5P29400 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A5P29400 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.74□□□□□ -2.13
COL4A5P29400 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A5P29400 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
COL4A5P29400 RNU4-51P-201ENST00000364206 140 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.74□□□□□ -2.13
COL4A5P29400 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
COL4A5P29400 RNA5SP56-201ENST00000410277 118 ntBASIC1.74□□□□□ -2.13
COL4A5P29400 SRIP3-201ENST00000413200 219 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms