Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AP002791.1-201ENST00000623291 381 ntBASIC3.47□□□□□ -1.85
BDNFP23560 MIR3199-2-201ENST00000636243 86 ntBASIC3.47□□□□□ -1.85
BDNFP23560 ELF2P3-201ENST00000445099 1506 ntBASIC3.47□□□□□ -1.85
BDNFP23560 AL021368.2-201ENST00000606125 5352 ntBASIC3.47□□□□□ -1.85
BDNFP23560 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
BDNFP23560 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
BDNFP23560 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.46□□□□□ -1.86
BDNFP23560 SNORA68.1-201ENST00000364537 132 ntBASIC3.46□□□□□ -1.86
BDNFP23560 U8.14-201ENST00000390843 143 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.46□□□□□ -1.86
BDNFP23560 AC023141.4-201ENST00000412031 328 ntBASIC3.46□□□□□ -1.86
BDNFP23560 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.46□□□□□ -1.86
BDNFP23560 HIGD1AP15-201ENST00000416198 280 ntBASIC3.46□□□□□ -1.86
BDNFP23560 RPL31P12-201ENST00000422587 358 ntBASIC3.46□□□□□ -1.86
BDNFP23560 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BDNFP23560 MED14P1-201ENST00000430517 648 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AC092427.1-202ENST00000430569 476 ntBASIC3.46□□□□□ -1.86
BDNFP23560 RPL37P21-201ENST00000435890 276 ntBASIC3.46□□□□□ -1.86
BDNFP23560 TIMM9P1-201ENST00000436122 256 ntBASIC3.46□□□□□ -1.86
BDNFP23560 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.46□□□□□ -1.86
BDNFP23560 OSTCP8-201ENST00000445117 448 ntBASIC3.46□□□□□ -1.86
BDNFP23560 NANOGNBP1-201ENST00000448444 480 ntBASIC3.46□□□□□ -1.86
BDNFP23560 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.46□□□□□ -1.86
BDNFP23560 SNORD97-201ENST00000459187 142 ntBASIC3.46□□□□□ -1.86
BDNFP23560 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.46□□□□□ -1.86
BDNFP23560 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.46□□□□□ -1.86
BDNFP23560 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.46□□□□□ -1.86
BDNFP23560 RNU6-1003P-201ENST00000517099 105 ntBASIC3.46□□□□□ -1.86
BDNFP23560 SCARNA11.3-201ENST00000517276 130 ntBASIC3.46□□□□□ -1.86
BDNFP23560 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.46□□□□□ -1.86
BDNFP23560 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.46□□□□□ -1.86
BDNFP23560 GLYCAM1-201ENST00000546596 285 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.46□□□□□ -1.86
BDNFP23560 AC009097.3-201ENST00000563557 1018 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AL356432.3-201ENST00000568952 465 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.46□□□□□ -1.86
BDNFP23560 AC234772.3-201ENST00000602277 528 ntBASIC3.46□□□□□ -1.86
BDNFP23560 uc_338.1-201ENST00000612113 180 ntBASIC3.46□□□□□ -1.86
BDNFP23560 DUSP12P1-201ENST00000612874 516 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AC025594.3-201ENST00000613068 790 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AL449363.1-201ENST00000617815 186 ntBASIC3.46□□□□□ -1.86
BDNFP23560 SNORD39.4-201ENST00000620099 78 ntBASIC3.46□□□□□ -1.86
BDNFP23560 AC091953.5-201ENST00000622919 233 ntBASIC3.46□□□□□ -1.86
BDNFP23560 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BDNFP23560 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
BDNFP23560 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
BDNFP23560 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.46□□□□□ -1.86
BDNFP23560 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BDNFP23560 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.46□□□□□ -1.86
BDNFP23560 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BDNFP23560 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
BDNFP23560 MIR30E-201ENST00000362104 92 ntBASIC3.45□□□□□ -1.86
BDNFP23560 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
BDNFP23560 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
BDNFP23560 RNU6-750P-201ENST00000390946 107 ntBASIC3.45□□□□□ -1.86
BDNFP23560 RSL24D1P4-201ENST00000400938 484 ntBASIC3.45□□□□□ -1.86
BDNFP23560 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 BX682237.1-201ENST00000415016 335 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.45□□□□□ -1.86
BDNFP23560 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.45□□□□□ -1.86
BDNFP23560 AC016696.1-201ENST00000446949 318 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.45□□□□□ -1.86
BDNFP23560 RPF2P2-201ENST00000504693 896 ntBASIC3.45□□□□□ -1.86
BDNFP23560 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.45□□□□□ -1.86
BDNFP23560 RPPH1-2P-201ENST00000516688 293 ntBASIC3.45□□□□□ -1.86
BDNFP23560 RNU6-143P-201ENST00000516942 93 ntBASIC3.45□□□□□ -1.86
BDNFP23560 RPS3AP4-201ENST00000555161 764 ntBASIC3.45□□□□□ -1.86
BDNFP23560 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.45□□□□□ -1.86
BDNFP23560 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.45□□□□□ -1.86
BDNFP23560 AC098826.3-201ENST00000603823 466 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AL161798.1-201ENST00000604630 131 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AC121334.2-201ENST00000605387 271 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AC135507.1-201ENST00000607214 561 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AC107214.2-201ENST00000608204 634 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AL355472.4-201ENST00000610233 626 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.45□□□□□ -1.86
BDNFP23560 AL157817.1-201ENST00000614264 790 ntBASIC3.45□□□□□ -1.86
BDNFP23560 AC079416.3-201ENST00000624479 549 ntBASIC3.45□□□□□ -1.86
BDNFP23560 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
BDNFP23560 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
BDNFP23560 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
BDNFP23560 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
BDNFP23560 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
BDNFP23560 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
BDNFP23560 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
BDNFP23560 AP002088.1-201ENST00000382740 395 ntBASIC3.44□□□□□ -1.86
BDNFP23560 RNU1-73P-201ENST00000383971 164 ntBASIC3.44□□□□□ -1.86
BDNFP23560 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
BDNFP23560 NDUFS5P1-201ENST00000405668 289 ntBASIC3.44□□□□□ -1.86
BDNFP23560 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.44□□□□□ -1.86
BDNFP23560 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.44□□□□□ -1.86
BDNFP23560 AL512649.1-201ENST00000428997 581 ntBASIC3.44□□□□□ -1.86
BDNFP23560 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms