Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.09□□□□□ -1.75
COL11A2P13942 AC090617.10-201ENST00000624308 134 ntBASIC4.09□□□□□ -1.75
COL11A2P13942 AC138305.3-201ENST00000624988 240 ntBASIC4.09□□□□□ -1.75
COL11A2P13942 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL11A2P13942 AC004944.1-201ENST00000517807 3059 ntBASIC4.09□□□□□ -1.75
COL11A2P13942 MTCO1P9-201ENST00000505577 1534 ntBASIC4.09□□□□□ -1.75
COL11A2P13942 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL11A2P13942 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL11A2P13942 Y_RNA.145-201ENST00000363527 102 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 RNY1P12-201ENST00000364251 105 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 RNA5SP296-201ENST00000410523 111 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A2P13942 AL031663.1-201ENST00000437445 219 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 RSU1P2-202ENST00000437884 485 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.09□□□□□ -1.76
COL11A2P13942 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.09□□□□□ -1.76
COL11A2P13942 MTCO3P2-201ENST00000457365 171 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 KC877373.1-201ENST00000479066 408 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AC010587.1-201ENST00000505809 469 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.09□□□□□ -1.76
COL11A2P13942 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A2P13942 AC112206.3-201ENST00000514578 389 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 MYL12AP1-201ENST00000518490 515 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A2P13942 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A2P13942 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A2P13942 COX6CP8-201ENST00000522620 226 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 PSMA2P1-201ENST00000526365 646 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A2P13942 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL11A2P13942 AC093913.1-201ENST00000614178 329 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AC010205.1-201ENST00000616668 449 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AL354950.2-201ENST00000617939 290 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 AC010149.2-201ENST00000637608 315 ntBASIC4.09□□□□□ -1.76
COL11A2P13942 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.09□□□□□ -1.76
COL11A2P13942 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL11A2P13942 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.08□□□□□ -1.76
COL11A2P13942 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.08□□□□□ -1.76
COL11A2P13942 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
COL11A2P13942 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.08□□□□□ -1.76
COL11A2P13942 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.08□□□□□ -1.76
COL11A2P13942 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
COL11A2P13942 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC062016.1-201ENST00000355719 319 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 SNORD42.2-201ENST00000365570 69 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 SNORA20.2-201ENST00000383922 131 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 Y_RNA.474-201ENST00000384341 102 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 AL136116.1-201ENST00000403591 381 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 MIR548P-201ENST00000408336 84 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 RNU4-47P-201ENST00000410876 114 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.08□□□□□ -1.76
COL11A2P13942 AL606489.2-201ENST00000433886 234 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 GPR143P-201ENST00000434155 205 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 AC093156.1-201ENST00000440382 670 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 BRK1P2-201ENST00000442875 223 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC026410.2-201ENST00000460281 156 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 RPS15AP17-201ENST00000470598 390 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 RN7SL429P-201ENST00000479090 223 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 RN7SL489P-201ENST00000486185 223 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 RN7SL327P-201ENST00000488659 223 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 AC090453.1-201ENST00000495560 436 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.08□□□□□ -1.76
COL11A2P13942 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.08□□□□□ -1.76
COL11A2P13942 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 AC130324.3-201ENST00000614165 542 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 RN7SL853P-201ENST00000617250 223 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC006504.1-201ENST00000562493 3666 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A2P13942 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.08□□□□□ -1.76
COL11A2P13942 AC006020.1-201ENST00000420179 1854 ntBASIC4.08□□□□□ -1.76
COL11A2P13942 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.08□□□□□ -1.76
COL11A2P13942 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A2P13942 AC134882.1-201ENST00000603738 1676 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A2P13942 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
COL11A2P13942 RNU5E-1-201ENST00000362477 120 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 AC019097.1-201ENST00000424783 735 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 MTCO3P21-201ENST00000430791 643 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 FTLP19-201ENST00000433300 394 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.07□□□□□ -1.76
COL11A2P13942 AC002381.1-201ENST00000447049 280 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 AC130509.1-201ENST00000464158 433 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.07□□□□□ -1.76
COL11A2P13942 TMEM251P1-201ENST00000503717 318 ntBASIC4.07□□□□□ -1.76
COL11A2P13942 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms