Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2□□□□□ -2.09
CD28P10747 LAMTOR5P1-201ENST00000444290 270 ntBASIC2□□□□□ -2.09
CD28P10747 CBWD4P-201ENST00000445695 655 ntBASIC2□□□□□ -2.09
CD28P10747 MRPL50P4-201ENST00000446432 475 ntBASIC2□□□□□ -2.09
CD28P10747 ATG12P2-201ENST00000456830 416 ntBASIC2□□□□□ -2.09
CD28P10747 RNU7-23P-201ENST00000459465 62 ntBASIC2□□□□□ -2.09
CD28P10747 MTND1P16-201ENST00000465177 898 ntBASIC2□□□□□ -2.09
CD28P10747 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2□□□□□ -2.09
CD28P10747 RPL9P33-201ENST00000484311 566 ntBASIC2□□□□□ -2.09
CD28P10747 HMGB1P36-201ENST00000487709 576 ntBASIC2□□□□□ -2.09
CD28P10747 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2□□□□□ -2.09
CD28P10747 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2□□□□□ -2.09
CD28P10747 MTATP6P9-201ENST00000515039 680 ntBASIC2□□□□□ -2.09
CD28P10747 RNU6-150P-201ENST00000516237 95 ntBASIC2□□□□□ -2.09
CD28P10747 RNA5SP282-201ENST00000516355 108 ntBASIC2□□□□□ -2.09
CD28P10747 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2□□□□□ -2.09
CD28P10747 AC087373.1-201ENST00000524920 491 ntBASIC2□□□□□ -2.09
CD28P10747 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2□□□□□ -2.09
CD28P10747 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CD28P10747 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2□□□□□ -2.09
CD28P10747 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2□□□□□ -2.09
CD28P10747 AC023813.2-201ENST00000564321 469 ntBASIC2□□□□□ -2.09
CD28P10747 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2□□□□□ -2.09
CD28P10747 SNORD53-201ENST00000579969 78 ntBASIC2□□□□□ -2.09
CD28P10747 AL136363.1-201ENST00000605349 337 ntBASIC2□□□□□ -2.09
CD28P10747 AC090186.1-201ENST00000605991 572 ntBASIC2□□□□□ -2.09
CD28P10747 UBE2Q2P6-201ENST00000612666 153 ntBASIC2□□□□□ -2.09
CD28P10747 AC009268.2-201ENST00000621925 457 ntBASIC2□□□□□ -2.09
CD28P10747 AC025034.2-201ENST00000623264 286 ntBASIC2□□□□□ -2.09
CD28P10747 AC002064.3-201ENST00000623448 346 ntBASIC2□□□□□ -2.09
CD28P10747 AC068880.5-201ENST00000624331 290 ntBASIC2□□□□□ -2.09
CD28P10747 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CD28P10747 ANKRD18EP-201ENST00000405487 2632 ntBASIC2□□□□□ -2.09
CD28P10747 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.99□□□□□ -2.09
CD28P10747 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.99□□□□□ -2.09
CD28P10747 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CD28P10747 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CD28P10747 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CD28P10747 RNU6-97P-201ENST00000363387 104 ntBASIC1.99□□□□□ -2.09
CD28P10747 SNORD114-30-201ENST00000364448 72 ntBASIC1.99□□□□□ -2.09
CD28P10747 RNU6-741P-201ENST00000383889 107 ntBASIC1.99□□□□□ -2.09
CD28P10747 Y_RNA.465-201ENST00000384293 102 ntBASIC1.99□□□□□ -2.09
CD28P10747 SNORA67.4-201ENST00000384688 142 ntBASIC1.99□□□□□ -2.09
CD28P10747 MIR27B-201ENST00000385129 97 ntBASIC1.99□□□□□ -2.09
CD28P10747 MIR620-201ENST00000385232 95 ntBASIC1.99□□□□□ -2.09
CD28P10747 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CD28P10747 AL590084.2-201ENST00000401481 382 ntBASIC1.99□□□□□ -2.09
CD28P10747 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CD28P10747 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 BX682237.1-201ENST00000415016 335 ntBASIC1.99□□□□□ -2.09
CD28P10747 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.99□□□□□ -2.09
CD28P10747 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 RPS25P9-201ENST00000435591 252 ntBASIC1.99□□□□□ -2.09
CD28P10747 MTCO2P20-201ENST00000437339 673 ntBASIC1.99□□□□□ -2.09
CD28P10747 SNRPEP7-201ENST00000438350 220 ntBASIC1.99□□□□□ -2.09
CD28P10747 Z82210.1-201ENST00000440037 231 ntBASIC1.99□□□□□ -2.09
CD28P10747 AC011816.1-201ENST00000441346 546 ntBASIC1.99□□□□□ -2.09
CD28P10747 PIGFP3-201ENST00000441918 722 ntBASIC1.99□□□□□ -2.09
CD28P10747 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 EXOSC3P1-201ENST00000448649 500 ntBASIC1.99□□□□□ -2.09
CD28P10747 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 MEMO1P3-201ENST00000459811 302 ntBASIC1.99□□□□□ -2.09
CD28P10747 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.99□□□□□ -2.09
CD28P10747 RPS20P22-201ENST00000473700 357 ntBASIC1.99□□□□□ -2.09
CD28P10747 LARP1BP2-201ENST00000486594 519 ntBASIC1.99□□□□□ -2.09
CD28P10747 AL049874.1-201ENST00000489560 388 ntBASIC1.99□□□□□ -2.09
CD28P10747 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CD28P10747 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 RN7SKP24-201ENST00000515888 284 ntBASIC1.99□□□□□ -2.09
CD28P10747 RNU6-928P-201ENST00000516876 104 ntBASIC1.99□□□□□ -2.09
CD28P10747 NRON-201ENST00000517270 370 ntBASIC1.99□□□□□ -2.09
CD28P10747 AC243972.3-201ENST00000539655 198 ntBASIC1.99□□□□□ -2.09
CD28P10747 AP002770.2-201ENST00000543613 532 ntBASIC1.99□□□□□ -2.09
CD28P10747 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.99□□□□□ -2.09
CD28P10747 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.99□□□□□ -2.09
CD28P10747 AL512310.1-201ENST00000548639 172 ntBASIC1.99□□□□□ -2.09
CD28P10747 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 TRAV28-201ENST00000557548 323 ntBASIC1.99□□□□□ -2.09
CD28P10747 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 AL121652.1-201ENST00000608851 448 ntBASIC1.99□□□□□ -2.09
CD28P10747 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.99□□□□□ -2.09
CD28P10747 AC064859.1-201ENST00000624741 174 ntBASIC1.99□□□□□ -2.09
CD28P10747 CTSLP2-204ENST00000629029 392 ntBASIC1.99□□□□□ -2.09
CD28P10747 AC116618.1-201ENST00000634617 774 ntBASIC1.99□□□□□ -2.09
CD28P10747 AL445984.1-201ENST00000637834 659 ntBASIC1.99□□□□□ -2.09
CD28P10747 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.99□□□□□ -2.09
CD28P10747 DDX10P1-201ENST00000448545 1933 ntBASIC1.99□□□□□ -2.09
CD28P10747 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CD28P10747 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CD28P10747 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
CD28P10747 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CD28P10747 AC009902.3-201ENST00000606235 2172 ntBASIC1.98□□□□□ -2.09
CD28P10747 RNA5SP289-201ENST00000362332 137 ntBASIC1.98□□□□□ -2.09
CD28P10747 RNU6-744P-201ENST00000365557 107 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms