Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 AC016397.1-201ENST00000412463 242 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 Z85995.1-201ENST00000415547 335 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFAP04085 GAPDHP25-201ENST00000447061 1001 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFAP04085 RN7SKP276-201ENST00000516242 268 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFAP04085 AC137627.1-201ENST00000545761 289 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFAP04085 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.92□□□□□ -1.62
PDGFAP04085 MED28P6-201ENST00000558776 231 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AC090517.1-201ENST00000569307 266 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 MIR5696-201ENST00000578474 85 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.92□□□□□ -1.62
PDGFAP04085 HMGB2P1-201ENST00000591146 634 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFAP04085 SNRPGP15-201ENST00000600149 222 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AL645944.1-201ENST00000603857 493 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AC008962.1-201ENST00000605729 304 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AP002826.1-201ENST00000608835 315 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AL731566.2-201ENST00000618971 317 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AC130454.1-201ENST00000622948 401 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFAP04085 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
PDGFAP04085 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.92□□□□□ -1.62
PDGFAP04085 INTS6P1-201ENST00000504674 2530 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
PDGFAP04085 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 AC032011.1-201ENST00000611703 1549 ntBASIC4.92□□□□□ -1.62
PDGFAP04085 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
PDGFAP04085 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PDGFAP04085 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFAP04085 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFAP04085 AC009643.2-201ENST00000603543 1448 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
PDGFAP04085 SNURFL-201ENST00000309296 343 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 Y_RNA.376-201ENST00000365638 108 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 UBBP2-201ENST00000376781 231 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 RNU6-398P-201ENST00000384143 109 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 Y_RNA.483-201ENST00000384380 101 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 RNU4-70P-201ENST00000384579 139 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 U3.42-201ENST00000408746 214 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 NDUFB4P7-201ENST00000423198 363 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 AL159987.2-201ENST00000432754 307 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFAP04085 RN7SL738P-201ENST00000470264 297 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 RPL23AP45-201ENST00000476406 468 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 AC007016.1-201ENST00000512110 244 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFAP04085 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.91□□□□□ -1.62
PDGFAP04085 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 BNIP3P1-201ENST00000547295 580 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.91□□□□□ -1.62
PDGFAP04085 AP000769.2-201ENST00000602344 396 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 AC008121.1-201ENST00000603244 268 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 AC093799.2-201ENST00000610062 578 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 AC064801.1-201ENST00000612025 407 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 AC141273.2-201ENST00000618989 130 ntBASIC4.91□□□□□ -1.62
PDGFAP04085 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFAP04085 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
PDGFAP04085 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFAP04085 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.91□□□□□ -1.62
PDGFAP04085 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PDGFAP04085 AL137141.1-201ENST00000624622 4836 ntBASIC4.9□□□□□ -1.62
PDGFAP04085 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFAP04085 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFAP04085 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PDGFAP04085 Y_RNA.19-201ENST00000362462 99 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 RNVU1-6-201ENST00000364688 164 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.9□□□□□ -1.63
PDGFAP04085 RNU6-1181P-201ENST00000384191 106 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 MIR10A-201ENST00000385043 110 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 MIR34A-201ENST00000385130 110 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 CYP4F29P-201ENST00000420685 446 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFAP04085 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.9□□□□□ -1.63
PDGFAP04085 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFAP04085 SNORD108-201ENST00000459332 71 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFAP04085 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFAP04085 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.9□□□□□ -1.63
PDGFAP04085 RNU6-397P-201ENST00000516226 104 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 RNA5SP291-201ENST00000517222 105 ntBASIC4.9□□□□□ -1.63
PDGFAP04085 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.9□□□□□ -1.63
PDGFAP04085 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms