Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL158211.4-201ENST00000606988 584 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC004832.5-201ENST00000608677 401 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC004067.1-201ENST00000608733 700 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AL355472.4-201ENST00000610233 626 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC025594.3-201ENST00000613068 790 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC034229.5-201ENST00000624258 185 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AL159972.1-201ENST00000625150 448 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC025048.6-202ENST00000627667 438 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 AC092125.1-201ENST00000562568 1995 ntBASIC2.86□□□□□ -1.95
MT-ND1P03886 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MT-ND1P03886 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
MT-ND1P03886 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MT-ND1P03886 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
MT-ND1P03886 AP003122.5-201ENST00000527668 3766 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
MT-ND1P03886 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
MT-ND1P03886 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.85□□□□□ -1.95
MT-ND1P03886 RNU5F-7P-201ENST00000363696 115 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
MT-ND1P03886 RNU6-533P-201ENST00000384144 107 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 RNY3P10-201ENST00000384764 102 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 RNA5SP274-201ENST00000410484 108 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AL359704.1-201ENST00000411586 781 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.85□□□□□ -1.95
MT-ND1P03886 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AL353705.1-201ENST00000433468 480 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AL031667.1-201ENST00000440222 725 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AC112653.1-201ENST00000443851 386 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 ST13P20-201ENST00000447996 1065 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AL590365.1-201ENST00000450788 243 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 RNU6-420P-201ENST00000458780 107 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AC010424.1-201ENST00000506336 297 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.85□□□□□ -1.95
MT-ND1P03886 FABP5P5-201ENST00000515537 406 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 SNORA31.22-201ENST00000517204 135 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.85□□□□□ -1.95
MT-ND1P03886 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AC060771.1-201ENST00000582031 164 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.85□□□□□ -1.95
MT-ND1P03886 AC064807.4-201ENST00000607201 407 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AL603839.4-201ENST00000624658 1005 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MT-ND1P03886 ASNSP3-201ENST00000451989 1306 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 AC092104.1-201ENST00000497346 1441 ntBASIC2.85□□□□□ -1.95
MT-ND1P03886 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
MT-ND1P03886 MTND5P7-201ENST00000413558 1798 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MT-ND1P03886 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MT-ND1P03886 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND1P03886 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.84□□□□□ -1.95
MT-ND1P03886 Y_RNA.553-201ENST00000384670 102 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 U3.20-201ENST00000390909 217 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 AL356967.1-201ENST00000406305 431 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 RPL17P12-201ENST00000413391 526 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 USP9YP13-201ENST00000417797 480 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 AC018630.2-202ENST00000422992 927 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 PPP1R11P2-201ENST00000423543 382 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 AL159987.2-201ENST00000432754 307 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 TAAR7P-201ENST00000436141 242 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 KATNBL1P3-201ENST00000443475 909 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.84□□□□□ -1.95
MT-ND1P03886 USP9YP29-201ENST00000445112 563 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.84□□□□□ -1.95
MT-ND1P03886 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.84□□□□□ -1.95
MT-ND1P03886 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.84□□□□□ -1.95
MT-ND1P03886 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND1P03886 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.84□□□□□ -1.95
MT-ND1P03886 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND1P03886 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.84□□□□□ -1.95
MT-ND1P03886 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.84□□□□□ -1.95
MT-ND1P03886 AC006362.1-201ENST00000567392 174 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 AC040904.1-201ENST00000590850 223 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 DUXAP4-201ENST00000603046 613 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 AC015871.2-201ENST00000603605 948 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 AC068276.1-201ENST00000605793 379 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.84□□□□□ -1.95
MT-ND1P03886 AL161637.1-201ENST00000622380 412 ntBASIC2.84□□□□□ -1.95
MT-ND1P03886 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.84□□□□□ -1.96
MT-ND1P03886 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.96
MT-ND1P03886 AC009902.3-201ENST00000606235 2172 ntBASIC2.84□□□□□ -1.96
MT-ND1P03886 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MT-ND1P03886 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC099654.7-201ENST00000635788 2127 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.83□□□□□ -1.96
MT-ND1P03886 AC073325.2-201ENST00000339545 159 ntBASIC2.83□□□□□ -1.96
MT-ND1P03886 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms