Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL1A1P02452 AC121333.1-201ENST00000567488 2709 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL1A1P02452 RNU6-461P-201ENST00000364195 107 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AL030996.1-201ENST00000411430 235 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC1.82□□□□□ -2.12
COL1A1P02452 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.82□□□□□ -2.12
COL1A1P02452 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.82□□□□□ -2.12
COL1A1P02452 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.82□□□□□ -2.12
COL1A1P02452 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.82□□□□□ -2.12
COL1A1P02452 SNORD121B-201ENST00000458838 81 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 NAP1L1P3-201ENST00000462291 880 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AC034222.1-201ENST00000494052 532 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.82□□□□□ -2.12
COL1A1P02452 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.82□□□□□ -2.12
COL1A1P02452 OR5BM1P-201ENST00000512021 366 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.82□□□□□ -2.12
COL1A1P02452 RNA5SP471-201ENST00000516971 106 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 RNU1-104P-201ENST00000517280 175 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.82□□□□□ -2.12
COL1A1P02452 AP001330.4-201ENST00000604350 154 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 OR10AB1P-201ENST00000609613 938 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 AC110792.4-201ENST00000609843 298 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.82□□□□□ -2.12
COL1A1P02452 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL1A1P02452 OR4G1P-203ENST00000641984 1631 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
COL1A1P02452 Y_RNA.178-201ENST00000363832 102 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 RNU6-374P-201ENST00000364146 108 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 RNU6-98P-201ENST00000384173 107 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 Y_RNA.493-201ENST00000384422 102 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.81□□□□□ -2.12
COL1A1P02452 AL354695.1-201ENST00000427935 228 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 MTND4LP16-201ENST00000440828 295 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AC017099.1-201ENST00000448261 1028 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.81□□□□□ -2.12
COL1A1P02452 RNU1-92P-201ENST00000517017 135 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AP005660.1-201ENST00000522972 293 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AP002748.2-201ENST00000528671 348 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AC016957.1-201ENST00000534895 309 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AC090666.1-201ENST00000578241 445 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
COL1A1P02452 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 HSPE1P7-201ENST00000604681 321 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AC106900.2-201ENST00000604994 317 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AL161629.2-201ENST00000615347 275 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 AC097372.4-201ENST00000625025 466 ntBASIC1.81□□□□□ -2.12
COL1A1P02452 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.8□□□□□ -2.12
COL1A1P02452 AC007342.9-201ENST00000623877 1385 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL1A1P02452 MIR320A-201ENST00000385302 82 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL1A1P02452 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL1A1P02452 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.8□□□□□ -2.12
COL1A1P02452 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.8□□□□□ -2.12
COL1A1P02452 AC244505.5-201ENST00000443639 207 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 SNRPGP6-201ENST00000451124 220 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.8□□□□□ -2.12
COL1A1P02452 AC092991.1-201ENST00000477176 376 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 HMGN1P7-201ENST00000491722 313 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL1A1P02452 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.8□□□□□ -2.12
COL1A1P02452 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.8□□□□□ -2.12
COL1A1P02452 AL157834.3-201ENST00000615543 103 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 AC068880.5-201ENST00000624331 290 ntBASIC1.8□□□□□ -2.12
COL1A1P02452 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL1A1P02452 Y_RNA.36-201ENST00000362602 112 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 RNA5SP363-201ENST00000365072 115 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 MIR1303-201ENST00000408625 86 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 Z85995.1-201ENST00000415547 335 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 AL357078.2-201ENST00000416486 427 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.79□□□□□ -2.12
COL1A1P02452 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.79□□□□□ -2.12
COL1A1P02452 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.79□□□□□ -2.12
COL1A1P02452 AC093281.2-201ENST00000510153 597 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 AC113155.1-201ENST00000511141 769 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.79□□□□□ -2.12
COL1A1P02452 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.79□□□□□ -2.12
COL1A1P02452 AC092470.1-201ENST00000546187 132 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 AC115989.2-201ENST00000578640 563 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 AC112503.2-201ENST00000609005 552 ntBASIC1.79□□□□□ -2.12
COL1A1P02452 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.79□□□□□ -2.12
COL1A1P02452 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
COL1A1P02452 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL1A1P02452 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.79□□□□□ -2.12
COL1A1P02452 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
COL1A1P02452 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COL1A1P02452 RNU6-53P-201ENST00000365367 106 ntBASIC1.78□□□□□ -2.12
COL1A1P02452 DSTNP4-201ENST00000399472 474 ntBASIC1.78□□□□□ -2.12
COL1A1P02452 ERHP2-201ENST00000402323 299 ntBASIC1.78□□□□□ -2.12
COL1A1P02452 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.78□□□□□ -2.12
COL1A1P02452 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.78□□□□□ -2.12
COL1A1P02452 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.78□□□□□ -2.12
COL1A1P02452 AC025768.1-201ENST00000510057 267 ntBASIC1.78□□□□□ -2.12
COL1A1P02452 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.78□□□□□ -2.12
COL1A1P02452 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.78□□□□□ -2.12
COL1A1P02452 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.78□□□□□ -2.12
COL1A1P02452 AC136443.5-201ENST00000603741 370 ntBASIC1.78□□□□□ -2.12
COL1A1P02452 AC106028.5-201ENST00000610332 395 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms