Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.17□□□□□ -2.22
SIX6O95475 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.17□□□□□ -2.22
SIX6O95475 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
SIX6O95475 MIR4529-201ENST00000578110 78 ntBASIC1.17□□□□□ -2.22
SIX6O95475 MIR502-201ENST00000606349 86 ntBASIC1.17□□□□□ -2.22
SIX6O95475 AL050343.2-201ENST00000607338 280 ntBASIC1.17□□□□□ -2.22
SIX6O95475 AP005212.4-201ENST00000614206 710 ntBASIC1.17□□□□□ -2.22
SIX6O95475 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.17□□□□□ -2.22
SIX6O95475 AC025263.3-201ENST00000622965 1396 ntBASIC1.17□□□□□ -2.22
SIX6O95475 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
SIX6O95475 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.16□□□□□ -2.22
SIX6O95475 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SIX6O95475 RNA5SP276-201ENST00000362580 94 ntBASIC1.16□□□□□ -2.22
SIX6O95475 RNU6-386P-201ENST00000362650 107 ntBASIC1.16□□□□□ -2.22
SIX6O95475 RNA5SP387-201ENST00000364226 106 ntBASIC1.16□□□□□ -2.22
SIX6O95475 RNU6-730P-201ENST00000383954 104 ntBASIC1.16□□□□□ -2.22
SIX6O95475 Z92545.1-201ENST00000411782 234 ntBASIC1.16□□□□□ -2.22
SIX6O95475 AL358453.1-201ENST00000422522 250 ntBASIC1.16□□□□□ -2.22
SIX6O95475 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.16□□□□□ -2.22
SIX6O95475 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SIX6O95475 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.16□□□□□ -2.22
SIX6O95475 AIMP1P2-201ENST00000425294 312 ntBASIC1.16□□□□□ -2.22
SIX6O95475 AC093106.2-201ENST00000428212 385 ntBASIC1.16□□□□□ -2.22
SIX6O95475 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.16□□□□□ -2.22
SIX6O95475 SNRPGP13-201ENST00000442212 177 ntBASIC1.16□□□□□ -2.22
SIX6O95475 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.16□□□□□ -2.22
SIX6O95475 AL049714.1-201ENST00000466686 347 ntBASIC1.16□□□□□ -2.22
SIX6O95475 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.16□□□□□ -2.22
SIX6O95475 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.16□□□□□ -2.22
SIX6O95475 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.16□□□□□ -2.22
SIX6O95475 AP005639.2-201ENST00000527592 928 ntBASIC1.16□□□□□ -2.22
SIX6O95475 AC087276.1-201ENST00000529659 480 ntBASIC1.16□□□□□ -2.22
SIX6O95475 AC010186.2-204ENST00000537668 439 ntBASIC1.16□□□□□ -2.22
SIX6O95475 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.16□□□□□ -2.22
SIX6O95475 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.16□□□□□ -2.22
SIX6O95475 AC055876.5-201ENST00000605667 259 ntBASIC1.16□□□□□ -2.22
SIX6O95475 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.16□□□□□ -2.22
SIX6O95475 AL354950.1-201ENST00000614150 568 ntBASIC1.16□□□□□ -2.22
SIX6O95475 AC006338.1-201ENST00000618453 749 ntBASIC1.16□□□□□ -2.22
SIX6O95475 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SIX6O95475 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.16□□□□□ -2.22
SIX6O95475 ZNF702P-202ENST00000434269 1966 ntBASIC1.16□□□□□ -2.22
SIX6O95475 RNA5SP125-201ENST00000364843 120 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.15□□□□□ -2.23
SIX6O95475 RNU6-19P-201ENST00000384718 107 ntBASIC1.15□□□□□ -2.23
SIX6O95475 RNU4-74P-201ENST00000411280 161 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AC099548.1-201ENST00000421443 426 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AC003685.2-201ENST00000422795 395 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AL009174.1-201ENST00000426577 416 ntBASIC1.15□□□□□ -2.23
SIX6O95475 FO393419.3-201ENST00000428741 282 ntBASIC1.15□□□□□ -2.23
SIX6O95475 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.15□□□□□ -2.23
SIX6O95475 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.15□□□□□ -2.23
SIX6O95475 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.15□□□□□ -2.23
SIX6O95475 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.15□□□□□ -2.23
SIX6O95475 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.15□□□□□ -2.23
SIX6O95475 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.15□□□□□ -2.23
SIX6O95475 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.15□□□□□ -2.23
SIX6O95475 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.15□□□□□ -2.23
SIX6O95475 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.15□□□□□ -2.23
SIX6O95475 RPL21P134-201ENST00000453468 483 ntBASIC1.15□□□□□ -2.23
SIX6O95475 RPL23AP3-201ENST00000453844 468 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AC107032.1-201ENST00000485945 480 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.15□□□□□ -2.23
SIX6O95475 RNU6-488P-201ENST00000515918 99 ntBASIC1.15□□□□□ -2.23
SIX6O95475 RNU5F-8P-201ENST00000515941 111 ntBASIC1.15□□□□□ -2.23
SIX6O95475 RNU1-103P-201ENST00000516502 125 ntBASIC1.15□□□□□ -2.23
SIX6O95475 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.15□□□□□ -2.23
SIX6O95475 AP004247.1-201ENST00000531556 1289 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AC084033.1-201ENST00000550830 633 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.15□□□□□ -2.23
SIX6O95475 MIR4255-201ENST00000579351 72 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.15□□□□□ -2.23
SIX6O95475 AL022099.1-201ENST00000604551 712 ntBASIC1.15□□□□□ -2.23
SIX6O95475 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SIX6O95475 AC110994.2-201ENST00000635481 492 ntBASIC1.15□□□□□ -2.23
SIX6O95475 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.15□□□□□ -2.23
SIX6O95475 OR5H6-203ENST00000642105 978 ntBASIC1.15□□□□□ -2.23
SIX6O95475 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.15□□□□□ -2.23
SIX6O95475 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
SIX6O95475 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
SIX6O95475 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
SIX6O95475 SNORA51.12-201ENST00000384448 134 ntBASIC1.14□□□□□ -2.23
SIX6O95475 RNU6-253P-201ENST00000384730 105 ntBASIC1.14□□□□□ -2.23
SIX6O95475 MIR583-201ENST00000384846 75 ntBASIC1.14□□□□□ -2.23
SIX6O95475 MIR504-201ENST00000385065 83 ntBASIC1.14□□□□□ -2.23
SIX6O95475 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
SIX6O95475 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
SIX6O95475 AL035405.1-201ENST00000400795 710 ntBASIC1.14□□□□□ -2.23
SIX6O95475 SNORA3.2-201ENST00000408221 125 ntBASIC1.14□□□□□ -2.23
SIX6O95475 RN7SKP158-201ENST00000410453 326 ntBASIC1.14□□□□□ -2.23
SIX6O95475 HMGB1P49-201ENST00000418882 569 ntBASIC1.14□□□□□ -2.23
SIX6O95475 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.14□□□□□ -2.23
SIX6O95475 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.14□□□□□ -2.23
SIX6O95475 SDAD1P3-201ENST00000427380 333 ntBASIC1.14□□□□□ -2.23
SIX6O95475 AL035410.1-201ENST00000427409 427 ntBASIC1.14□□□□□ -2.23
SIX6O95475 MTND4LP10-201ENST00000435146 291 ntBASIC1.14□□□□□ -2.23
SIX6O95475 AC015922.2-201ENST00000435593 184 ntBASIC1.14□□□□□ -2.23
SIX6O95475 AP000949.1-201ENST00000438328 629 ntBASIC1.14□□□□□ -2.23
SIX6O95475 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms