Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.92□□□□□ -1.62
VAMP4O75379 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VAMP4O75379 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VAMP4O75379 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VAMP4O75379 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.92□□□□□ -1.62
VAMP4O75379 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VAMP4O75379 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.91□□□□□ -1.62
VAMP4O75379 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.91□□□□□ -1.62
VAMP4O75379 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
VAMP4O75379 RNU6-960P-201ENST00000364056 120 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 U8.11-201ENST00000384699 133 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 U8.12-201ENST00000384701 133 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 RNU6-516P-201ENST00000411381 104 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 OR6C66P-201ENST00000414917 930 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 RPS7P15-201ENST00000415804 584 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.91□□□□□ -1.62
VAMP4O75379 AL139247.1-201ENST00000422768 325 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AC005094.1-201ENST00000440420 368 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AL118520.1-201ENST00000450770 291 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 SNORD97-201ENST00000459187 142 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 RNU7-180P-201ENST00000459240 63 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 U8.18-201ENST00000459285 133 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.91□□□□□ -1.62
VAMP4O75379 MTCO1P29-201ENST00000496868 288 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.91□□□□□ -1.62
VAMP4O75379 RN7SKP13-201ENST00000515933 244 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 RNA5SP503-201ENST00000517047 117 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 RNU6-64P-201ENST00000517119 105 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 RPL7P20-201ENST00000520308 745 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.91□□□□□ -1.62
VAMP4O75379 AC007991.1-201ENST00000522680 631 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.91□□□□□ -1.62
VAMP4O75379 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.91□□□□□ -1.62
VAMP4O75379 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.91□□□□□ -1.62
VAMP4O75379 AC087499.8-201ENST00000578406 226 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.91□□□□□ -1.62
VAMP4O75379 AL022099.1-201ENST00000604551 712 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 MIR4496-201ENST00000635896 61 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 AP004289.2-201ENST00000444413 1457 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.91□□□□□ -1.62
VAMP4O75379 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 PABPC1P7-201ENST00000413177 1513 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 BDP1P-201ENST00000582658 1990 ntBASIC4.91□□□□□ -1.62
VAMP4O75379 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VAMP4O75379 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
VAMP4O75379 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
VAMP4O75379 AC027287.1-201ENST00000553115 1453 ntBASIC4.9□□□□□ -1.62
VAMP4O75379 Y_RNA.138-201ENST00000363462 102 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 Y_RNA.530-201ENST00000384587 101 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AL359634.1-202ENST00000404721 284 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 RN7SKP177-201ENST00000410567 355 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC004552.1-201ENST00000419089 348 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP4O75379 SNORD19B-201ENST00000459623 84 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 RPS26P3-201ENST00000470205 348 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC090543.2-201ENST00000483963 348 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC004057.1-201ENST00000485827 348 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC135721.1-201ENST00000497954 479 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.9□□□□□ -1.63
VAMP4O75379 RNA5SP208-201ENST00000516156 78 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.9□□□□□ -1.63
VAMP4O75379 AC022695.1-201ENST00000522089 237 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 OR5B10P-201ENST00000532869 642 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.9□□□□□ -1.63
VAMP4O75379 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP4O75379 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.9□□□□□ -1.63
VAMP4O75379 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.9□□□□□ -1.63
VAMP4O75379 AC093227.2-201ENST00000589357 285 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC067852.4-201ENST00000590314 478 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 BNIP3P22-201ENST00000593399 556 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AC006329.2-201ENST00000611491 394 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VAMP4O75379 AC011155.2-201ENST00000623202 216 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 AL136313.1-201ENST00000624804 202 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.9□□□□□ -1.63
VAMP4O75379 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.9□□□□□ -1.63
VAMP4O75379 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.9□□□□□ -1.63
VAMP4O75379 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.9□□□□□ -1.63
VAMP4O75379 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VAMP4O75379 LINC01355-201ENST00000566551 5444 ntBASIC4.9□□□□□ -1.63
VAMP4O75379 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.9□□□□□ -1.63
VAMP4O75379 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VAMP4O75379 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP4O75379 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP4O75379 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
VAMP4O75379 RNU6-179P-201ENST00000363350 107 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 Y_RNA.301-201ENST00000364990 103 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 Y_RNA.373-201ENST00000365600 103 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.89□□□□□ -1.63
VAMP4O75379 RNU2-36P-201ENST00000410361 191 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 RNA5SP107-201ENST00000411358 122 ntBASIC4.89□□□□□ -1.63
VAMP4O75379 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.89□□□□□ -1.63
VAMP4O75379 PPIAP3-201ENST00000450588 505 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms