Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CPNE3O75131 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.89□□□□□ -1.63
CPNE3O75131 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CPNE3O75131 AC100778.3-201ENST00000580060 1750 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CPNE3O75131 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CPNE3O75131 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CPNE3O75131 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.88□□□□□ -1.63
CPNE3O75131 ZNF72P-201ENST00000425869 1908 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.88□□□□□ -1.63
CPNE3O75131 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CPNE3O75131 Y_RNA.245-201ENST00000364493 95 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 RNU4-42P-201ENST00000364738 142 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 RNU6-384P-201ENST00000364900 104 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 UBBP2-201ENST00000376781 231 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 MIR589-201ENST00000385238 99 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CPNE3O75131 RNA5SP296-201ENST00000410523 111 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 RPS15AP10-201ENST00000432472 382 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.88□□□□□ -1.63
CPNE3O75131 OSTCP8-201ENST00000445117 448 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.88□□□□□ -1.63
CPNE3O75131 CHEK2P4-201ENST00000450340 246 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 FABP5P15-201ENST00000453566 214 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 HMGN2P13-201ENST00000476476 274 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 AL160314.1-201ENST00000490836 438 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 COX6B1P5-201ENST00000509843 249 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 SNORA40.14-201ENST00000516543 86 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 RNU7-4P-201ENST00000516961 62 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 ATP5F1P5-201ENST00000526403 760 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.88□□□□□ -1.63
CPNE3O75131 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.88□□□□□ -1.63
CPNE3O75131 MIR4691-201ENST00000583764 85 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 FAM25E-202ENST00000608562 189 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 AC107871.2-201ENST00000612894 502 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 AL442067.1-201ENST00000613261 223 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.88□□□□□ -1.63
CPNE3O75131 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.88□□□□□ -1.63
CPNE3O75131 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.88□□□□□ -1.63
CPNE3O75131 DDX18P3-201ENST00000404856 2007 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 AC004817.4-201ENST00000602396 3625 ntBASIC4.88□□□□□ -1.63
CPNE3O75131 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CPNE3O75131 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.88□□□□□ -1.63
CPNE3O75131 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CPNE3O75131 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CPNE3O75131 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
CPNE3O75131 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CPNE3O75131 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CPNE3O75131 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CPNE3O75131 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
CPNE3O75131 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CPNE3O75131 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CPNE3O75131 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CPNE3O75131 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CPNE3O75131 RPL9P7-201ENST00000330965 580 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RNU4-44P-201ENST00000363050 141 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RN7SKP113-201ENST00000363891 295 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RNU6-1317P-201ENST00000364582 104 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 U8.8-201ENST00000365399 135 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RNU6-784P-201ENST00000384330 106 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 SNORA66-201ENST00000384792 133 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AL592148.1-201ENST00000413568 445 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.87□□□□□ -1.63
CPNE3O75131 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.87□□□□□ -1.63
CPNE3O75131 Z85995.1-201ENST00000415547 335 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 COX6B1P1-201ENST00000415962 213 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 TOMM22P1-201ENST00000418578 312 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.87□□□□□ -1.63
CPNE3O75131 RPL7AP49-201ENST00000429522 581 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AL356867.1-201ENST00000429623 299 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AL591438.1-201ENST00000433508 581 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.87□□□□□ -1.63
CPNE3O75131 RPL19P16-201ENST00000433839 588 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AL513043.1-201ENST00000439124 535 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RPL21P2-201ENST00000440049 481 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.87□□□□□ -1.63
CPNE3O75131 PCNPP5-201ENST00000452246 481 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 snoU13.24-201ENST00000458998 104 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RPL9P9-202ENST00000466501 579 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AC133134.1-201ENST00000466800 359 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RN7SL244P-201ENST00000493405 297 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 HMGB1P22-201ENST00000505315 124 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 Y_RNA.668-201ENST00000516233 93 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 RN7SKP276-201ENST00000516242 268 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 Y_RNA.687-201ENST00000516558 91 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 Y_RNA.715-201ENST00000517082 110 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.87□□□□□ -1.63
CPNE3O75131 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.87□□□□□ -1.63
CPNE3O75131 AC040926.1-201ENST00000530195 238 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CPNE3O75131 AC022882.1-201ENST00000532142 501 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.87□□□□□ -1.63
CPNE3O75131 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.87□□□□□ -1.63
CPNE3O75131 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.87□□□□□ -1.63
CPNE3O75131 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.87□□□□□ -1.63
CPNE3O75131 AP000787.2-201ENST00000604432 568 ntBASIC4.87□□□□□ -1.63
CPNE3O75131 AC011373.1-201ENST00000607270 237 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms