Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD6O43541 FAM103A2P-201ENST00000444122 354 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 AC002381.1-201ENST00000447049 280 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.63□□□□□ -1.83
SMAD6O43541 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 RN7SL293P-201ENST00000481765 281 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.63□□□□□ -1.83
SMAD6O43541 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD6O43541 AC110768.1-201ENST00000509222 400 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 FGF7P4-201ENST00000509595 295 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 HPRT1P3-201ENST00000539521 576 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.63□□□□□ -1.83
SMAD6O43541 AC006116.10-201ENST00000591836 581 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AC022432.1-201ENST00000595739 310 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 KLKP1-201ENST00000595979 403 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 BBIP1P1-201ENST00000602999 279 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 IGHV3-29-201ENST00000604817 344 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 U3.45-201ENST00000607547 219 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD6O43541 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD6O43541 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.63□□□□□ -1.83
SMAD6O43541 AC010149.2-201ENST00000637608 315 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 NUP58P1-201ENST00000502546 1738 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AL365440.1-201ENST00000436135 2167 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 MAPK10-373ENST00000641983 6772 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.63□□□□□ -1.83
SMAD6O43541 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.62□□□□□ -1.83
SMAD6O43541 RNU5E-1-201ENST00000362477 120 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNU4-79P-201ENST00000362764 141 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 SNORA63-201ENST00000363450 132 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNU6-359P-201ENST00000365466 108 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 RNU6-692P-201ENST00000384496 107 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 MIR490-201ENST00000384865 128 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 ARF4P3-201ENST00000397387 509 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 MRPL42P2-201ENST00000403169 426 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNA5SP118-201ENST00000410385 109 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNU2-8P-201ENST00000410727 190 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 RPL21P66-201ENST00000426566 466 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 ATP5JP1-201ENST00000431631 322 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 SEPT14P3-201ENST00000439401 183 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 AL732372.2-207ENST00000445840 183 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 SEPT14P2-201ENST00000453405 183 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 MTCO3P2-201ENST00000457365 171 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 U3.44-201ENST00000458938 192 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC083798.1-201ENST00000472671 131 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.62□□□□□ -1.83
SMAD6O43541 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 SEPT14P4-201ENST00000513445 186 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RN7SKP83-201ENST00000516512 178 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNU6-714P-201ENST00000516963 103 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNU6-835P-201ENST00000516974 104 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNU6-201P-201ENST00000517100 61 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.62□□□□□ -1.83
SMAD6O43541 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.62□□□□□ -1.83
SMAD6O43541 FO082796.1-201ENST00000523795 183 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC007458.1-201ENST00000542812 373 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC123904.2-201ENST00000548059 300 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC008127.2-201ENST00000549925 1075 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.62□□□□□ -1.83
SMAD6O43541 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.62□□□□□ -1.83
SMAD6O43541 AC018638.8-201ENST00000588755 281 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AL034351.1-201ENST00000605288 668 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AC069200.1-201ENST00000609511 323 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AL132765.2-201ENST00000610812 351 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.62□□□□□ -1.83
SMAD6O43541 AL158801.5-201ENST00000623123 465 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 AL732372.2-225ENST00000642124 456 ntBASIC3.62□□□□□ -1.83
SMAD6O43541 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
SMAD6O43541 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SMAD6O43541 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.62□□□□□ -1.83
SMAD6O43541 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SMAD6O43541 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.62□□□□□ -1.83
SMAD6O43541 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.61□□□□□ -1.83
SMAD6O43541 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SMAD6O43541 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms