Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.95□□□□□ -1.78
PROM1O43490 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.95□□□□□ -1.78
PROM1O43490 NCAPGP2-201ENST00000557911 754 ntBASIC3.95□□□□□ -1.78
PROM1O43490 ZNF192P1-203ENST00000565888 810 ntBASIC3.95□□□□□ -1.78
PROM1O43490 AC012182.1-201ENST00000570133 895 ntBASIC3.95□□□□□ -1.78
PROM1O43490 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.95□□□□□ -1.78
PROM1O43490 MIR4742-201ENST00000581069 85 ntBASIC3.95□□□□□ -1.78
PROM1O43490 AC005498.1-201ENST00000592125 465 ntBASIC3.95□□□□□ -1.78
PROM1O43490 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.95□□□□□ -1.78
PROM1O43490 AC005034.5-201ENST00000604219 466 ntBASIC3.95□□□□□ -1.78
PROM1O43490 RNU6-89P-201ENST00000606519 100 ntBASIC3.95□□□□□ -1.78
PROM1O43490 MIR1302-2-201ENST00000607096 138 ntBASIC3.95□□□□□ -1.78
PROM1O43490 AL160413.1-201ENST00000622780 310 ntBASIC3.95□□□□□ -1.78
PROM1O43490 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.95□□□□□ -1.78
PROM1O43490 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PROM1O43490 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
PROM1O43490 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.94□□□□□ -1.78
PROM1O43490 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 AP004289.2-201ENST00000444413 1457 ntBASIC3.94□□□□□ -1.78
PROM1O43490 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PROM1O43490 AC073343.1-201ENST00000328239 651 ntBASIC3.94□□□□□ -1.78
PROM1O43490 MIR383-201ENST00000362257 73 ntBASIC3.94□□□□□ -1.78
PROM1O43490 RNU6-179P-201ENST00000363350 107 ntBASIC3.94□□□□□ -1.78
PROM1O43490 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PROM1O43490 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PROM1O43490 RNA5SP171-201ENST00000391071 115 ntBASIC3.94□□□□□ -1.78
PROM1O43490 RNU4-78P-201ENST00000410940 126 ntBASIC3.94□□□□□ -1.78
PROM1O43490 RNA5SP306-201ENST00000411087 107 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.94□□□□□ -1.78
PROM1O43490 AC092447.6-201ENST00000414578 210 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.94□□□□□ -1.78
PROM1O43490 AC068533.1-201ENST00000418542 415 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.94□□□□□ -1.78
PROM1O43490 AC018630.2-202ENST00000422992 927 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC006946.1-201ENST00000429106 328 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC010655.1-201ENST00000449336 292 ntBASIC3.94□□□□□ -1.78
PROM1O43490 HMGB3P22-202ENST00000451823 572 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.94□□□□□ -1.78
PROM1O43490 RNA5SP246-201ENST00000458909 119 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AF213884.1-201ENST00000488102 463 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC092436.1-201ENST00000506450 503 ntBASIC3.94□□□□□ -1.78
PROM1O43490 MTCO3P9-201ENST00000506989 781 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.94□□□□□ -1.78
PROM1O43490 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.94□□□□□ -1.78
PROM1O43490 OR8R1P-201ENST00000543943 764 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.94□□□□□ -1.78
PROM1O43490 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.94□□□□□ -1.78
PROM1O43490 AL442663.2-201ENST00000554385 511 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.94□□□□□ -1.78
PROM1O43490 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.94□□□□□ -1.78
PROM1O43490 AC026464.5-201ENST00000562497 722 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.94□□□□□ -1.78
PROM1O43490 MIR4775-201ENST00000581168 75 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC006130.2-201ENST00000586202 326 ntBASIC3.94□□□□□ -1.78
PROM1O43490 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.94□□□□□ -1.78
PROM1O43490 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.94□□□□□ -1.78
PROM1O43490 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.94□□□□□ -1.78
PROM1O43490 AC048347.1-201ENST00000624621 427 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC112200.1-201ENST00000625015 234 ntBASIC3.94□□□□□ -1.78
PROM1O43490 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.94□□□□□ -1.78
PROM1O43490 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.94□□□□□ -1.78
PROM1O43490 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 AC004972.1-201ENST00000623934 2209 ntBASIC3.94□□□□□ -1.78
PROM1O43490 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PROM1O43490 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.93□□□□□ -1.78
PROM1O43490 MTND4P14-201ENST00000435799 1354 ntBASIC3.93□□□□□ -1.78
PROM1O43490 EXOC5P1-201ENST00000510543 1969 ntBASIC3.93□□□□□ -1.78
PROM1O43490 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
PROM1O43490 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.93□□□□□ -1.78
PROM1O43490 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PROM1O43490 Y_RNA.184-201ENST00000363884 108 ntBASIC3.93□□□□□ -1.78
PROM1O43490 RNU6-188P-201ENST00000364207 107 ntBASIC3.93□□□□□ -1.78
PROM1O43490 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PROM1O43490 RNU6-637P-201ENST00000384050 107 ntBASIC3.93□□□□□ -1.78
PROM1O43490 RNU6-903P-201ENST00000391270 109 ntBASIC3.93□□□□□ -1.78
PROM1O43490 MIR1183-201ENST00000408856 89 ntBASIC3.93□□□□□ -1.78
PROM1O43490 RNA5SP56-201ENST00000410277 118 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.93□□□□□ -1.78
PROM1O43490 OR6C66P-201ENST00000414917 930 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.93□□□□□ -1.78
PROM1O43490 AL645937.1-202ENST00000421799 937 ntBASIC3.93□□□□□ -1.78
PROM1O43490 CYCSP43-201ENST00000438233 310 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AC016696.1-201ENST00000446949 318 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AL162395.1-201ENST00000457882 422 ntBASIC3.93□□□□□ -1.78
PROM1O43490 snoU109.4-201ENST00000458953 143 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AC006517.1-201ENST00000480485 328 ntBASIC3.93□□□□□ -1.78
PROM1O43490 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PROM1O43490 AP002812.1-201ENST00000495378 474 ntBASIC3.93□□□□□ -1.78
PROM1O43490 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.93□□□□□ -1.78
PROM1O43490 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PROM1O43490 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PROM1O43490 TTC39CP1-201ENST00000512513 755 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms