Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MTND5P42-201ENST00000637720 498 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC004972.1-201ENST00000623934 2209 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
PHGDHO43175 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.9□□□□□ -1.78
PHGDHO43175 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PHGDHO43175 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PHGDHO43175 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
PHGDHO43175 MIR423-201ENST00000362201 94 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 RNU6-552P-201ENST00000362869 119 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 Y_RNA.303-201ENST00000364998 94 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 MIR141-201ENST00000384975 95 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 MIR493-201ENST00000385254 89 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 UBE2V1P2-201ENST00000397758 440 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 HSPE1P26-201ENST00000405341 275 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 RNU2-37P-201ENST00000410695 177 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AC022028.1-201ENST00000412054 408 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 OR9R1P-201ENST00000412200 877 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 RPL30P2-201ENST00000414021 291 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AC108032.1-201ENST00000416706 207 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AL139413.1-201ENST00000421309 217 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 CALM1P1-201ENST00000442082 433 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 PRDX3P3-201ENST00000447765 522 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AL500522.2-201ENST00000448562 343 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AL118520.1-201ENST00000450770 291 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.9□□□□□ -1.79
PHGDHO43175 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.9□□□□□ -1.79
PHGDHO43175 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.9□□□□□ -1.79
PHGDHO43175 BTF3L4P4-201ENST00000506381 449 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.9□□□□□ -1.79
PHGDHO43175 AP005435.4-201ENST00000529514 284 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.9□□□□□ -1.79
PHGDHO43175 HSPE1P5-201ENST00000561489 272 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.9□□□□□ -1.79
PHGDHO43175 AC034102.8-201ENST00000615146 484 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AL359547.2-201ENST00000615810 418 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AC090132.2-201ENST00000615881 347 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AC010338.1-201ENST00000621823 717 ntBASIC3.9□□□□□ -1.79
PHGDHO43175 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
PHGDHO43175 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.9□□□□□ -1.79
PHGDHO43175 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.9□□□□□ -1.79
PHGDHO43175 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.79
PHGDHO43175 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PHGDHO43175 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PHGDHO43175 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PHGDHO43175 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.9□□□□□ -1.79
PHGDHO43175 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHGDHO43175 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHGDHO43175 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.89□□□□□ -1.79
PHGDHO43175 AC006504.1-201ENST00000562493 3666 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.89□□□□□ -1.79
PHGDHO43175 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHGDHO43175 RPL7P26-201ENST00000333817 754 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 RNA5SP130-201ENST00000364431 114 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AL136116.1-201ENST00000403591 381 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.89□□□□□ -1.79
PHGDHO43175 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.89□□□□□ -1.79
PHGDHO43175 CYP4F29P-201ENST00000420685 446 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 CALM2P2-201ENST00000428512 440 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 ATP5HP2-201ENST00000433885 485 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AL591212.2-201ENST00000433923 257 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 HMGB1P12-201ENST00000438594 598 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 CBWD4P-201ENST00000445695 655 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 NUTF2P3-201ENST00000448540 384 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AC009220.1-201ENST00000451614 275 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 SNORD60.2-201ENST00000516883 86 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 SUMO2P20-201ENST00000520803 283 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.89□□□□□ -1.79
PHGDHO43175 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 AC023575.1-201ENST00000580510 358 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.89□□□□□ -1.79
PHGDHO43175 AC091167.4-201ENST00000605079 184 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AL670379.4-201ENST00000605279 254 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AC004825.2-201ENST00000616634 455 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.89□□□□□ -1.79
PHGDHO43175 AC024614.3-201ENST00000637860 256 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PHGDHO43175 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PHGDHO43175 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.89□□□□□ -1.79
PHGDHO43175 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PHGDHO43175 RIOK3P1-201ENST00000418778 1528 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 AL672296.1-201ENST00000427780 2158 ntBASIC3.89□□□□□ -1.79
PHGDHO43175 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
PHGDHO43175 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PHGDHO43175 AL354685.2-201ENST00000448218 1447 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PHGDHO43175 Y_RNA.88-201ENST00000363029 99 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 SNORA62-201ENST00000365493 153 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RNU6-903P-201ENST00000391270 109 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RNU4-6P-201ENST00000410804 122 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RNA5SP111-201ENST00000411386 101 ntBASIC3.88□□□□□ -1.79
PHGDHO43175 RPS12P24-201ENST00000412619 387 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms