Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNORD62.1-201ENST00000362541 86 ntBASIC2.43□□□□□ -2.02
LSM1O15116 Y_RNA.333-201ENST00000365274 102 ntBASIC2.43□□□□□ -2.02
LSM1O15116 SNORA70.4-201ENST00000365509 134 ntBASIC2.43□□□□□ -2.02
LSM1O15116 SNORA6-201ENST00000384033 151 ntBASIC2.43□□□□□ -2.02
LSM1O15116 RNU6-1207P-201ENST00000384343 107 ntBASIC2.43□□□□□ -2.02
LSM1O15116 RNU6-298P-201ENST00000390888 96 ntBASIC2.43□□□□□ -2.02
LSM1O15116 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.43□□□□□ -2.02
LSM1O15116 AL451054.2-201ENST00000420896 202 ntBASIC2.43□□□□□ -2.02
LSM1O15116 ZNF863P-201ENST00000426746 417 ntBASIC2.43□□□□□ -2.02
LSM1O15116 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.43□□□□□ -2.02
LSM1O15116 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.43□□□□□ -2.02
LSM1O15116 MTND1P31-201ENST00000449206 961 ntBASIC2.43□□□□□ -2.02
LSM1O15116 AC021382.1-201ENST00000483523 359 ntBASIC2.43□□□□□ -2.02
LSM1O15116 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LSM1O15116 SUMO2P5-201ENST00000506790 245 ntBASIC2.43□□□□□ -2.02
LSM1O15116 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.43□□□□□ -2.02
LSM1O15116 AC008837.2-201ENST00000513076 418 ntBASIC2.43□□□□□ -2.02
LSM1O15116 RN7SKP132-201ENST00000516001 208 ntBASIC2.43□□□□□ -2.02
LSM1O15116 SNORA31.18-201ENST00000517043 134 ntBASIC2.43□□□□□ -2.02
LSM1O15116 SCARNA11.3-201ENST00000517276 130 ntBASIC2.43□□□□□ -2.02
LSM1O15116 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.43□□□□□ -2.02
LSM1O15116 OR5BN1P-201ENST00000532955 829 ntBASIC2.43□□□□□ -2.02
LSM1O15116 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.43□□□□□ -2.02
LSM1O15116 CYCSP2-201ENST00000558168 301 ntBASIC2.43□□□□□ -2.02
LSM1O15116 MTND3P13-201ENST00000574391 343 ntBASIC2.43□□□□□ -2.02
LSM1O15116 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.43□□□□□ -2.02
LSM1O15116 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.43□□□□□ -2.02
LSM1O15116 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.43□□□□□ -2.02
LSM1O15116 AL138478.1-201ENST00000612252 832 ntBASIC2.43□□□□□ -2.02
LSM1O15116 AC104763.3-201ENST00000613765 618 ntBASIC2.43□□□□□ -2.02
LSM1O15116 HMGB1P24-202ENST00000615653 685 ntBASIC2.43□□□□□ -2.02
LSM1O15116 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LSM1O15116 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
LSM1O15116 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LSM1O15116 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LSM1O15116 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LSM1O15116 AL161781.1-201ENST00000354277 403 ntBASIC2.42□□□□□ -2.02
LSM1O15116 RNU6-621P-201ENST00000364752 109 ntBASIC2.42□□□□□ -2.02
LSM1O15116 RNU6-140P-201ENST00000384566 108 ntBASIC2.42□□□□□ -2.02
LSM1O15116 MIR888-201ENST00000401186 77 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AL162578.1-201ENST00000406202 378 ntBASIC2.42□□□□□ -2.02
LSM1O15116 U3.37-201ENST00000408528 213 ntBASIC2.42□□□□□ -2.02
LSM1O15116 RNU6-1328P-201ENST00000410938 106 ntBASIC2.42□□□□□ -2.02
LSM1O15116 MTND1P21-201ENST00000412991 285 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.42□□□□□ -2.02
LSM1O15116 TIMM9P2-201ENST00000419324 266 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.42□□□□□ -2.02
LSM1O15116 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.42□□□□□ -2.02
LSM1O15116 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.42□□□□□ -2.02
LSM1O15116 RPL36AP51-201ENST00000487216 318 ntBASIC2.42□□□□□ -2.02
LSM1O15116 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.42□□□□□ -2.02
LSM1O15116 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.42□□□□□ -2.02
LSM1O15116 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.42□□□□□ -2.02
LSM1O15116 SCARNA17.1-201ENST00000516211 143 ntBASIC2.42□□□□□ -2.02
LSM1O15116 SCARNA17.2-201ENST00000516334 143 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AP000889.2-201ENST00000532684 490 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AL359212.1-201ENST00000556608 614 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.42□□□□□ -2.02
LSM1O15116 AC009127.3-201ENST00000570531 403 ntBASIC2.42□□□□□ -2.02
LSM1O15116 ELOCP29-201ENST00000588193 334 ntBASIC2.42□□□□□ -2.02
LSM1O15116 BNIP3P22-201ENST00000593399 556 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.42□□□□□ -2.02
LSM1O15116 SCARNA17.4-201ENST00000614296 143 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
LSM1O15116 AC009268.2-201ENST00000621925 457 ntBASIC2.42□□□□□ -2.02
LSM1O15116 MIR7515-201ENST00000637837 67 ntBASIC2.42□□□□□ -2.02
LSM1O15116 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LSM1O15116 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.42□□□□□ -2.02
LSM1O15116 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.42□□□□□ -2.02
LSM1O15116 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LSM1O15116 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.41□□□□□ -2.02
LSM1O15116 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.41□□□□□ -2.02
LSM1O15116 RNU6-859P-201ENST00000362728 107 ntBASIC2.41□□□□□ -2.02
LSM1O15116 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
LSM1O15116 U8.8-201ENST00000365399 135 ntBASIC2.41□□□□□ -2.02
LSM1O15116 RNU1-52P-201ENST00000384190 164 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AL590084.2-201ENST00000401481 382 ntBASIC2.41□□□□□ -2.02
LSM1O15116 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LSM1O15116 RN7SKP140-201ENST00000411196 284 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AC069282.1-201ENST00000411911 526 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.41□□□□□ -2.02
LSM1O15116 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM1O15116 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.41□□□□□ -2.02
LSM1O15116 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.41□□□□□ -2.02
LSM1O15116 MTCO3P30-201ENST00000426425 670 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AC107083.1-201ENST00000439643 279 ntBASIC2.41□□□□□ -2.02
LSM1O15116 RPL23AP76-201ENST00000441860 458 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.41□□□□□ -2.02
LSM1O15116 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM1O15116 COX6CP12-201ENST00000446748 202 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AL031659.1-201ENST00000447075 539 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM1O15116 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LSM1O15116 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM1O15116 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM1O15116 NDUFB4P2-201ENST00000509515 391 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.41□□□□□ -2.02
LSM1O15116 MIR3616-201ENST00000584070 92 ntBASIC2.41□□□□□ -2.02
LSM1O15116 AL451007.1-201ENST00000595491 289 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms