Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.9□□□□□ -2.11
UBFD1O14562 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.9□□□□□ -2.11
UBFD1O14562 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBFD1O14562 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBFD1O14562 snoU13.28-201ENST00000459235 104 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
UBFD1O14562 AC013828.1-201ENST00000481845 158 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 Y_RNA.676-201ENST00000516393 96 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC011260.1-201ENST00000578420 472 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC015688.2-201ENST00000584523 262 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC013444.2-201ENST00000603317 787 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 RPAP2P1-201ENST00000603626 1168 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC091946.2-201ENST00000606105 291 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.9□□□□□ -2.11
UBFD1O14562 AC097504.2-201ENST00000608088 454 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AP002826.1-201ENST00000608835 315 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AL354696.1-201ENST00000614652 497 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC006213.4-201ENST00000616184 634 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 AC009090.3-201ENST00000616553 565 ntBASIC1.9□□□□□ -2.11
UBFD1O14562 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
UBFD1O14562 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
UBFD1O14562 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
UBFD1O14562 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.89□□□□□ -2.11
UBFD1O14562 AL589826.1-201ENST00000340697 249 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
UBFD1O14562 MCTS2P-201ENST00000394552 546 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AL035405.1-201ENST00000400795 710 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AL355615.1-201ENST00000406187 641 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AL355497.1-201ENST00000406262 551 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 PTGES3P2-201ENST00000407942 482 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 RNU2-28P-201ENST00000410457 189 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC027644.1-201ENST00000419595 298 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 MTCO3P1-205ENST00000422088 832 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.89□□□□□ -2.11
UBFD1O14562 RPL26P6-201ENST00000440913 438 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AL353718.1-201ENST00000451028 517 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 TRBV1-201ENST00000476502 284 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC022493.1-201ENST00000492984 337 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.89□□□□□ -2.11
UBFD1O14562 AC113420.1-201ENST00000507903 571 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC116337.1-201ENST00000509680 687 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 OR5BM1P-201ENST00000512021 366 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.89□□□□□ -2.11
UBFD1O14562 HMGN1P28-201ENST00000521340 364 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.89□□□□□ -2.11
UBFD1O14562 AC068339.2-201ENST00000534395 618 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.89□□□□□ -2.11
UBFD1O14562 CR383656.7-201ENST00000548164 174 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.89□□□□□ -2.11
UBFD1O14562 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.89□□□□□ -2.11
UBFD1O14562 AC098483.2-201ENST00000603158 454 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AP002906.1-201ENST00000603405 233 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AP000238.1-201ENST00000608759 426 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC090772.4-201ENST00000623599 362 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC010872.1-201ENST00000624225 675 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AC068880.5-201ENST00000624331 290 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 AL512506.2-201ENST00000624472 458 ntBASIC1.89□□□□□ -2.11
UBFD1O14562 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
UBFD1O14562 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
UBFD1O14562 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
UBFD1O14562 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.88□□□□□ -2.11
UBFD1O14562 HMGB1P5-201ENST00000255320 642 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.88□□□□□ -2.11
UBFD1O14562 RNU6-198P-201ENST00000384258 104 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 RPL22P22-201ENST00000395439 379 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UBFD1O14562 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.88□□□□□ -2.11
UBFD1O14562 AL365496.1-201ENST00000426885 215 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 Z98742.2-201ENST00000431564 187 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 AL158053.1-201ENST00000441503 453 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 VN1R10P-201ENST00000447106 875 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 AC104164.3-201ENST00000467363 1258 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 COX7A2P2-201ENST00000505291 250 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 AC112518.2-201ENST00000508565 425 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
UBFD1O14562 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.88□□□□□ -2.11
UBFD1O14562 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 AL049838.1-201ENST00000563647 981 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.88□□□□□ -2.11
UBFD1O14562 AC010546.1-201ENST00000569391 485 ntBASIC1.88□□□□□ -2.11
UBFD1O14562 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms