Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR217-201ENST00000384817 110 ntBASIC3.41□□□□□ -1.86
CUX2O14529 RNU6-1000P-201ENST00000391066 106 ntBASIC3.41□□□□□ -1.86
CUX2O14529 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.41□□□□□ -1.86
CUX2O14529 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.41□□□□□ -1.86
CUX2O14529 COX6CP18-201ENST00000448769 222 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.41□□□□□ -1.86
CUX2O14529 AC092991.1-201ENST00000477176 376 ntBASIC3.41□□□□□ -1.86
CUX2O14529 KLRA1P-201ENST00000503499 986 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC004062.1-201ENST00000509926 645 ntBASIC3.41□□□□□ -1.86
CUX2O14529 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.41□□□□□ -1.86
CUX2O14529 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.41□□□□□ -1.86
CUX2O14529 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.41□□□□□ -1.86
CUX2O14529 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CUX2O14529 AC012360.2-201ENST00000609349 391 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.41□□□□□ -1.86
CUX2O14529 AC013562.2-201ENST00000611632 603 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AL592148.2-201ENST00000612210 372 ntBASIC3.41□□□□□ -1.86
CUX2O14529 Y_RNA.783-201ENST00000613546 102 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AL138955.1-201ENST00000622881 1040 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AL157770.1-201ENST00000623049 439 ntBASIC3.41□□□□□ -1.86
CUX2O14529 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CUX2O14529 RNA5SP258-201ENST00000362750 119 ntBASIC3.41□□□□□ -1.86
CUX2O14529 DEFB109C-201ENST00000382575 264 ntBASIC3.41□□□□□ -1.86
CUX2O14529 DEFB109B-201ENST00000382656 264 ntBASIC3.41□□□□□ -1.86
CUX2O14529 RNU6-339P-201ENST00000384310 107 ntBASIC3.41□□□□□ -1.86
CUX2O14529 RNU6-298P-201ENST00000390888 96 ntBASIC3.41□□□□□ -1.86
CUX2O14529 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.41□□□□□ -1.86
CUX2O14529 MTND4P3-201ENST00000417829 541 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.41□□□□□ -1.86
CUX2O14529 PTGES3P1-201ENST00000439531 483 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.41□□□□□ -1.86
CUX2O14529 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.41□□□□□ -1.86
CUX2O14529 AL049829.1-201ENST00000465411 156 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.41□□□□□ -1.86
CUX2O14529 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.41□□□□□ -1.86
CUX2O14529 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.41□□□□□ -1.86
CUX2O14529 RNU6-250P-201ENST00000516958 103 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.41□□□□□ -1.86
CUX2O14529 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.41□□□□□ -1.86
CUX2O14529 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.41□□□□□ -1.86
CUX2O14529 AC098848.2-201ENST00000588023 330 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC011468.4-201ENST00000603942 409 ntBASIC3.41□□□□□ -1.86
CUX2O14529 BNIP3P31-201ENST00000604515 566 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC073387.2-201ENST00000604797 784 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.41□□□□□ -1.86
CUX2O14529 AC253576.2-201ENST00000618815 580 ntBASIC3.41□□□□□ -1.86
CUX2O14529 AC007275.1-201ENST00000621243 671 ntBASIC3.41□□□□□ -1.86
CUX2O14529 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CUX2O14529 SNORD82-201ENST00000365530 70 ntBASIC3.4□□□□□ -1.87
CUX2O14529 RNU6-730P-201ENST00000383954 104 ntBASIC3.4□□□□□ -1.87
CUX2O14529 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.4□□□□□ -1.87
CUX2O14529 RAD23BP2-201ENST00000416003 1207 ntBASIC3.4□□□□□ -1.87
CUX2O14529 FNDC3CP-201ENST00000420795 1155 ntBASIC3.4□□□□□ -1.87
CUX2O14529 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.4□□□□□ -1.87
CUX2O14529 MTND2P29-201ENST00000438595 412 ntBASIC3.4□□□□□ -1.87
CUX2O14529 AC093155.1-201ENST00000440164 826 ntBASIC3.4□□□□□ -1.87
CUX2O14529 MTCO1P48-201ENST00000448024 1096 ntBASIC3.4□□□□□ -1.87
CUX2O14529 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CUX2O14529 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.4□□□□□ -1.87
CUX2O14529 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.4□□□□□ -1.87
CUX2O14529 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.4□□□□□ -1.87
CUX2O14529 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.4□□□□□ -1.87
CUX2O14529 AL035411.2-201ENST00000604022 421 ntBASIC3.4□□□□□ -1.87
CUX2O14529 AC013437.2-201ENST00000639587 677 ntBASIC3.4□□□□□ -1.87
CUX2O14529 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CUX2O14529 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CUX2O14529 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CUX2O14529 DDX10P1-201ENST00000448545 1933 ntBASIC3.39□□□□□ -1.87
CUX2O14529 RNU6-1257P-201ENST00000384625 110 ntBASIC3.39□□□□□ -1.87
CUX2O14529 RNU2-28P-201ENST00000410457 189 ntBASIC3.39□□□□□ -1.87
CUX2O14529 MTCO3P12-201ENST00000416718 547 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AC027644.1-201ENST00000419595 298 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.39□□□□□ -1.87
CUX2O14529 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.39□□□□□ -1.87
CUX2O14529 RPL7P37-201ENST00000425095 738 ntBASIC3.39□□□□□ -1.87
CUX2O14529 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.39□□□□□ -1.87
CUX2O14529 AL034418.1-201ENST00000448675 860 ntBASIC3.39□□□□□ -1.87
CUX2O14529 PABPC1P3-201ENST00000469174 459 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AC079203.1-201ENST00000487972 404 ntBASIC3.39□□□□□ -1.87
CUX2O14529 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CUX2O14529 RNU6-1028P-201ENST00000517164 93 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AC087441.2-201ENST00000529141 262 ntBASIC3.39□□□□□ -1.87
CUX2O14529 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.39□□□□□ -1.87
CUX2O14529 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.39□□□□□ -1.87
CUX2O14529 AC005951.1-201ENST00000576706 485 ntBASIC3.39□□□□□ -1.87
CUX2O14529 MIR5708-201ENST00000579723 85 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AC090425.2-201ENST00000608818 501 ntBASIC3.39□□□□□ -1.87
CUX2O14529 AL590282.1-201ENST00000610379 1136 ntBASIC3.39□□□□□ -1.87
CUX2O14529 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CUX2O14529 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.39□□□□□ -1.87
CUX2O14529 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.38□□□□□ -1.87
CUX2O14529 RNU6-1027P-201ENST00000383998 107 ntBASIC3.38□□□□□ -1.87
CUX2O14529 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CUX2O14529 AC005005.2-201ENST00000420779 380 ntBASIC3.38□□□□□ -1.87
CUX2O14529 DPRXP1-201ENST00000426312 460 ntBASIC3.38□□□□□ -1.87
CUX2O14529 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.38□□□□□ -1.87
CUX2O14529 RPL21P104-201ENST00000464143 478 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 250.6 ms