Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU1-6P-201ENST00000516290 144 ntBASIC5.03□□□□□ -1.6
SOX1O00570 RN7SKP83-201ENST00000516512 178 ntBASIC5.03□□□□□ -1.6
SOX1O00570 ERHP1-201ENST00000523006 310 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX1O00570 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX1O00570 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.03□□□□□ -1.6
SOX1O00570 AC053481.4-201ENST00000583164 216 ntBASIC5.03□□□□□ -1.6
SOX1O00570 MIR5188-201ENST00000583467 113 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AL360012.1-201ENST00000602813 131 ntBASIC5.03□□□□□ -1.6
SOX1O00570 ELOCP5-201ENST00000604924 333 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AC007619.2-201ENST00000605743 379 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AL355810.1-201ENST00000614629 552 ntBASIC5.03□□□□□ -1.6
SOX1O00570 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX1O00570 U3.53-201ENST00000628922 216 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AL596275.2-204ENST00000641628 552 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AL596275.2-206ENST00000641957 626 ntBASIC5.03□□□□□ -1.6
SOX1O00570 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX1O00570 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SOX1O00570 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 PABPC1P7-201ENST00000413177 1513 ntBASIC5.02□□□□□ -1.61
SOX1O00570 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX1O00570 AC112198.2-201ENST00000426589 6996 ntBASIC5.02□□□□□ -1.61
SOX1O00570 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX1O00570 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX1O00570 AC093671.1-201ENST00000624981 2929 ntBASIC5.02□□□□□ -1.61
SOX1O00570 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX1O00570 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
SOX1O00570 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.02□□□□□ -1.61
SOX1O00570 OR56A5-201ENST00000340110 738 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RN7SKP185-201ENST00000362813 326 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RNU6-371P-201ENST00000364283 108 ntBASIC5.02□□□□□ -1.61
SOX1O00570 SNORA71.2-201ENST00000364941 134 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RNA5SP223-201ENST00000365174 120 ntBASIC5.02□□□□□ -1.61
SOX1O00570 Y_RNA.515-201ENST00000384535 112 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RNU6-14P-201ENST00000384630 106 ntBASIC5.02□□□□□ -1.61
SOX1O00570 MT-TW-201ENST00000387382 68 ntBASIC5.02□□□□□ -1.61
SOX1O00570 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SOX1O00570 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX1O00570 RNU6-1156P-201ENST00000410365 100 ntBASIC5.02□□□□□ -1.61
SOX1O00570 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.02□□□□□ -1.61
SOX1O00570 ELOCP18-201ENST00000434209 337 ntBASIC5.02□□□□□ -1.61
SOX1O00570 AL500522.2-201ENST00000448562 343 ntBASIC5.02□□□□□ -1.61
SOX1O00570 AL031274.1-201ENST00000450334 232 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RPL23AP31-201ENST00000456160 467 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RPS17P2-201ENST00000461663 408 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RPL36AP41-201ENST00000493820 306 ntBASIC5.02□□□□□ -1.61
SOX1O00570 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX1O00570 GMPSP1-201ENST00000514075 579 ntBASIC5.02□□□□□ -1.61
SOX1O00570 RNU6-1023P-201ENST00000516137 106 ntBASIC5.02□□□□□ -1.61
SOX1O00570 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SOX1O00570 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.02□□□□□ -1.61
SOX1O00570 MIR3128-201ENST00000581957 66 ntBASIC5.02□□□□□ -1.61
SOX1O00570 AL121932.1-201ENST00000605542 214 ntBASIC5.02□□□□□ -1.61
SOX1O00570 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX1O00570 AC103858.2-201ENST00000621471 543 ntBASIC5.02□□□□□ -1.61
SOX1O00570 MIR4496-201ENST00000635896 61 ntBASIC5.02□□□□□ -1.61
SOX1O00570 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
SOX1O00570 AC125336.1-201ENST00000508893 2827 ntBASIC5.02□□□□□ -1.61
SOX1O00570 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX1O00570 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX1O00570 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
SOX1O00570 AC008669.1-201ENST00000565823 2178 ntBASIC5.02□□□□□ -1.61
SOX1O00570 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.02□□□□□ -1.61
SOX1O00570 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX1O00570 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX1O00570 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SOX1O00570 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX1O00570 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SOX1O00570 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SOX1O00570 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX1O00570 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX1O00570 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX1O00570 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SOX1O00570 RNA5SP124-201ENST00000362739 110 ntBASIC5.01□□□□□ -1.61
SOX1O00570 Y_RNA.214-201ENST00000364201 112 ntBASIC5.01□□□□□ -1.61
SOX1O00570 SNORA20.1-201ENST00000364790 130 ntBASIC5.01□□□□□ -1.61
SOX1O00570 SNORA73.2-201ENST00000364946 201 ntBASIC5.01□□□□□ -1.61
SOX1O00570 Y_RNA.551-201ENST00000384661 102 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AL138885.1-201ENST00000405921 675 ntBASIC5.01□□□□□ -1.61
SOX1O00570 MIR1250-201ENST00000408098 113 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.01□□□□□ -1.61
SOX1O00570 SAGE2P-201ENST00000420011 2126 ntBASIC5.01□□□□□ -1.61
SOX1O00570 RBMY1KP-201ENST00000423480 476 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AC008065.1-201ENST00000428525 348 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AC009238.2-201ENST00000431026 355 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AC099670.2-201ENST00000435130 321 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AL691482.1-201ENST00000453255 87 ntBASIC5.01□□□□□ -1.61
SOX1O00570 RN7SL197P-201ENST00000466981 299 ntBASIC5.01□□□□□ -1.61
SOX1O00570 HIGD1AP3-201ENST00000515857 278 ntBASIC5.01□□□□□ -1.61
SOX1O00570 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.01□□□□□ -1.61
SOX1O00570 MIR5692A1-201ENST00000580523 69 ntBASIC5.01□□□□□ -1.61
SOX1O00570 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.01□□□□□ -1.61
SOX1O00570 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms