Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MTATP6P3-201ENST00000581686 676 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 SNRPGP15-201ENST00000600149 222 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL138960.2-201ENST00000625145 535 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 SNORD56.4-201ENST00000363883 71 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 RNU2-21P-201ENST00000410368 188 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 ELOCP11-201ENST00000436690 332 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 CALM1P1-201ENST00000442082 433 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 ELOCP16-201ENST00000444494 332 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC073901.1-201ENST00000462471 408 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 FABP5P5-201ENST00000515537 406 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 SNORA31.11-201ENST00000516528 139 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 RN7SKP49-201ENST00000516675 260 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AP001029.3-201ENST00000588063 596 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC098483.2-201ENST00000603158 454 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC124016.2-201ENST00000610058 665 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC006329.2-201ENST00000611491 394 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC104307.1-201ENST00000616142 196 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AL158801.5-201ENST00000623123 465 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 AC020923.1-201ENST00000624021 917 ntBASIC1.41□□□□□ -2.18
COL6A6A6NMZ7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 RNU1-22P-201ENST00000363334 158 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 RNU6-609P-201ENST00000365459 107 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 SNORA67.6-201ENST00000391093 99 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 NUP35P2-201ENST00000416748 943 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC244098.2-201ENST00000422068 99 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AL022400.1-201ENST00000423946 935 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC010301.1-201ENST00000473936 355 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 RPS27P23-201ENST00000487608 251 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 RNF138P1-201ENST00000502765 546 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 KLRA1P-201ENST00000503499 986 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC104057.1-201ENST00000515547 497 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 Y_RNA.675-201ENST00000516389 149 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 RNA5SP135-201ENST00000517019 125 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC090330.1-201ENST00000588646 764 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AL592148.2-201ENST00000612210 372 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AL512506.1-201ENST00000613918 449 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC006927.4-201ENST00000639187 543 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 RNU6-619P-201ENST00000365146 108 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 RNU2-71P-201ENST00000411395 189 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 LINC01347-201ENST00000417964 355 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 USP9YP21-201ENST00000420603 432 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 UBE2D3P3-201ENST00000426992 425 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 OR51AB1P-201ENST00000429046 620 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 MTCYBP45-201ENST00000435243 565 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 snoU109.4-201ENST00000458953 143 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC013553.2-201ENST00000604244 589 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC010738.1-201ENST00000604970 987 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AL355802.4-201ENST00000607635 548 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 AC008121.3-201ENST00000618726 433 ntBASIC1.4□□□□□ -2.19
COL6A6A6NMZ7 PABPC1P9-201ENST00000426076 1612 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 RNU2-42P-201ENST00000410697 113 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC109780.2-201ENST00000413467 845 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 MTCYBP24-201ENST00000420387 1106 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 HSPE1P1-201ENST00000421494 318 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 DEFB130D-201ENST00000426866 237 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 MTND1P33-201ENST00000446251 917 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 TPT1P14-201ENST00000448018 505 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 USP9YP10-201ENST00000454868 628 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 FCF1P6-201ENST00000456841 595 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC104689.1-201ENST00000473356 768 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC008427.1-201ENST00000503102 655 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 BOLA3P3-201ENST00000505182 232 ntBASIC1.39□□□□□ -2.19
COL6A6A6NMZ7 AC124293.1-201ENST00000530034 493 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms