Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 MIR607-201ENST00000385241 96 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 NEFMP1-201ENST00000443423 1006 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 OR4V1P-201ENST00000525394 1140 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC007115.1-201ENST00000546853 234 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AL390240.1-201ENST00000612950 384 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AC110792.3-201ENST00000595906 1614 ntBASIC1.23□□□□□ -2.21
CNOT1A5YKK6 AL596028.1-201ENST00000326971 197 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 RNA5SP354-201ENST00000391247 136 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 HMGN2P30-201ENST00000423237 256 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 UBE2V1P13-201ENST00000436983 439 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 BMI1P1-201ENST00000445879 941 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 RPL21P103-201ENST00000479921 488 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 OSBPL9P3-201ENST00000534523 595 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AC009127.3-201ENST00000570531 403 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AL449363.1-201ENST00000617815 186 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 RNU2-40P-201ENST00000410833 196 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AC108059.3-201ENST00000456388 214 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 RNU6-943P-201ENST00000516960 98 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 GLUD1P4-201ENST00000590914 418 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AC090525.3-201ENST00000605601 189 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 MIR6840-201ENST00000611937 71 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AC145207.9-201ENST00000623802 325 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 AP003072.4-201ENST00000624580 310 ntBASIC1.22□□□□□ -2.21
CNOT1A5YKK6 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CNOT1A5YKK6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC098592.2-201ENST00000413158 265 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AL445669.1-201ENST00000426743 755 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC008962.1-201ENST00000605729 304 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AL161734.1-201ENST00000609720 557 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.21□□□□□ -2.22
CNOT1A5YKK6 SNORA6-201ENST00000384033 151 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 CYCSP33-201ENST00000414485 327 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 RPS23P3-201ENST00000470993 430 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 MTCO2P9-201ENST00000503214 694 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.21□□□□□ -2.22
CNOT1A5YKK6 CBX3P8-201ENST00000532412 525 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC024619.4-201ENST00000580924 316 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 RPS15AP11-201ENST00000594193 385 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AP000254.1-201ENST00000609934 520 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC140725.3-201ENST00000616193 880 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AC007742.2-201ENST00000618226 398 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CNOT1A5YKK6 AP000560.1-201ENST00000624150 1937 ntBASIC1.21□□□□□ -2.22
CNOT1A5YKK6 RNU4-72P-201ENST00000410754 173 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC090774.1-201ENST00000435925 246 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AL031659.1-201ENST00000447075 539 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC234775.1-201ENST00000454247 670 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC006499.2-201ENST00000513470 337 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 OR5AQ1P-201ENST00000527596 927 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 MTND4LP5-201ENST00000605152 292 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AL133507.1-201ENST00000605269 557 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AL020996.3-201ENST00000606617 222 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 MIR6076-201ENST00000617521 113 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC006249.1-201ENST00000621223 471 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC116563.2-201ENST00000624751 535 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 MIR338-201ENST00000636369 67 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.2□□□□□ -2.22
CNOT1A5YKK6 CENPCP1-201ENST00000533085 2578 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CNOT1A5YKK6 SNORD48-201ENST00000364953 64 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.2□□□□□ -2.22
CNOT1A5YKK6 RNU6-1077P-201ENST00000410506 102 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CNOT1A5YKK6 PGBD4P3-201ENST00000440731 581 ntBASIC1.2□□□□□ -2.22
CNOT1A5YKK6 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.2□□□□□ -2.22
CNOT1A5YKK6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms