Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNA5SP498-201ENST00000411342 120 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 BX510359.2-201ENST00000417920 305 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 RPL21P109-201ENST00000422213 475 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AL645568.3-201ENST00000433683 316 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AL450023.3-201ENST00000440592 271 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AL513124.1-201ENST00000450410 614 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 RNU7-187P-201ENST00000458985 68 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 RN7SL443P-201ENST00000464331 290 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 RN7SL441P-201ENST00000492388 296 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC073073.1-201ENST00000493920 463 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC010469.2-201ENST00000496412 480 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC008958.1-201ENST00000511047 682 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 RNU6-1219P-201ENST00000516143 112 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 IGHVII-62-1-201ENST00000519283 235 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC018442.3-201ENST00000523025 183 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC009643.1-201ENST00000532030 391 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 NDUFB4P11-201ENST00000560510 395 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 ATP5J2P6-201ENST00000565203 266 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 SS18L2P2-201ENST00000583960 235 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 Y_RNA.802-201ENST00000614892 130 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 MIR6758-201ENST00000620653 63 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC039056.2-201ENST00000622261 511 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 CR381572.2-201ENST00000624852 397 ntBASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PDZRN3Q9UPQ7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 SNORA16.2-201ENST00000390991 127 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 Y_RNA.581-201ENST00000391017 97 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 RNU6-174P-201ENST00000410406 106 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AL691482.1-201ENST00000453255 87 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 RPS17P2-201ENST00000461663 408 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AC069499.1-201ENST00000489433 509 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 RNU6-426P-201ENST00000516464 97 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AC109479.2-201ENST00000517842 174 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 RPL23AP53-201ENST00000521854 457 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AF279873.1-201ENST00000523393 313 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AC090525.3-201ENST00000605601 189 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AC015914.2-201ENST00000618167 288 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AP000843.1-201ENST00000624880 701 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 AP000560.1-201ENST00000624150 1937 ntBASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PDZRN3Q9UPQ7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AC005005.4-201ENST00000623789 16698 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 Y_RNA.151-201ENST00000363566 112 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 RNU6-151P-201ENST00000364158 107 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 Y_RNA.218-201ENST00000364218 104 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 SNORA62.2-201ENST00000364672 152 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 MIR628-201ENST00000385229 95 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 SNORD70.1-201ENST00000391007 85 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 RNA5SP332-201ENST00000391063 115 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 RPL30P2-201ENST00000414021 291 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AL591623.2-201ENST00000449978 222 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 RNU7-167P-201ENST00000459160 62 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 RPL21P8-201ENST00000465083 535 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 MRPS33P2-201ENST00000507850 322 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 RNU2-10P-201ENST00000516375 211 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AC106782.4-201ENST00000568264 210 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms