Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ZFRP1-201ENST00000457579 2970 ntBASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
AP4E1Q9UPM8 Y_RNA.151-201ENST00000363566 112 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 RNU4-42P-201ENST00000364738 142 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.314-201ENST00000365114 102 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 RNU6-45P-201ENST00000384471 107 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AL138885.1-201ENST00000405921 675 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 SYF2P2-201ENST00000417620 583 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AL160275.3-201ENST00000423876 471 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AL133396.1-201ENST00000432048 687 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 NEFMP1-201ENST00000443423 1006 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 TDGF1P1-201ENST00000445734 527 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AL591473.1-201ENST00000464297 313 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 RN7SL826P-201ENST00000479724 288 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 VN1R105P-201ENST00000486595 910 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 ERHP1-201ENST00000523006 310 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AC040926.1-201ENST00000530195 238 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 OR5D17P-201ENST00000531492 978 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AC093227.2-201ENST00000589357 285 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AL138825.1-201ENST00000618587 192 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 MAPK10-263ENST00000641052 4307 ntBASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.9□□□□□ -1.63
AP4E1Q9UPM8 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.14-201ENST00000362415 103 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RNU1-83P-201ENST00000363426 164 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.518-201ENST00000384552 113 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RNU6-178P-201ENST00000384631 104 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC110754.1-201ENST00000399740 601 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP125-201ENST00000410481 302 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP100-201ENST00000411258 284 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC010683.1-201ENST00000473673 378 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP276-201ENST00000516242 268 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RNU6-352P-201ENST00000516908 107 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RNU6-677P-201ENST00000516914 101 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP60-201ENST00000516985 239 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC103783.1-201ENST00000520506 373 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC090151.1-201ENST00000520784 730 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC051619.2-201ENST00000559063 397 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 MIR4737-201ENST00000583979 81 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC104763.2-201ENST00000604179 382 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AL161616.1-201ENST00000611867 286 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AC103858.2-201ENST00000621471 543 ntBASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
AP4E1Q9UPM8 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.26-201ENST00000362539 101 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.117-201ENST00000363294 101 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.214-201ENST00000364201 112 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 RNU6-1329P-201ENST00000365664 107 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.577-201ENST00000384794 101 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 SNORA11B-201ENST00000408175 129 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 MIR1302-6-201ENST00000408466 90 ntBASIC4.88□□□□□ -1.63
AP4E1Q9UPM8 MIR1271-201ENST00000408537 86 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms