Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 APOOP1-201ENST00000604695 592 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 MIR6748-201ENST00000610433 71 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PPARGC1AQ9UBK2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RNA5SP502-201ENST00000362694 119 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RNY4P36-201ENST00000391116 96 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 U3.22-201ENST00000391120 215 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AL121834.1-202ENST00000404494 277 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC093106.2-201ENST00000428212 385 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RPS29P17-201ENST00000430795 166 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AL591704.1-201ENST00000432574 275 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AF228730.2-201ENST00000438784 848 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 NIPA2P5-201ENST00000452282 464 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC010469.1-201ENST00000463864 576 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC130509.1-201ENST00000464158 433 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RNA5SP154-201ENST00000516193 111 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-256P-201ENST00000516747 97 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 TRMT10BP1-201ENST00000519377 943 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RAB9BP1-201ENST00000519581 626 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC009643.1-201ENST00000532030 391 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC106782.4-201ENST00000568264 210 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC023043.2-201ENST00000589678 1026 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AL160290.3-201ENST00000604869 165 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC245389.1-201ENST00000605141 529 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 Z98200.1-201ENST00000607298 470 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC009570.1-201ENST00000609599 745 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AL359547.2-201ENST00000615810 418 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AL138721.1-201ENST00000616756 179 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AL713922.2-201ENST00000619384 716 ntBASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.51□□□□□ -1.69
PPARGC1AQ9UBK2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 MIR331-201ENST00000362302 94 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 RNA5SP509-201ENST00000364577 119 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-701P-201ENST00000384059 107 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 SNORD116-29-201ENST00000384516 83 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 Y_RNA.579-201ENST00000390939 94 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AL360182.1-201ENST00000397433 468 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 RPL18P10-201ENST00000425606 538 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 HMGB3P11-201ENST00000440127 604 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC011276.1-201ENST00000469688 323 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 RN7SL481P-201ENST00000477764 299 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-1088P-201ENST00000516850 104 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC135001.1-201ENST00000544546 283 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 IMMP1LP2-201ENST00000552954 492 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AL163153.1-201ENST00000554223 283 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 MTCO3P23-201ENST00000561363 289 ntBASIC4.5□□□□□ -1.69
PPARGC1AQ9UBK2 MIR4277-201ENST00000578298 84 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms