Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL360221.1-201ENST00000445989 335 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 Z82190.1-201ENST00000454534 490 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 PABPC1P3-201ENST00000469174 459 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 RPS27P23-201ENST00000487608 251 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC068781.1-201ENST00000488231 618 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC104685.1-201ENST00000502445 371 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 SUMO2P6-201ENST00000505273 288 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 ANXA2P1-201ENST00000505539 926 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC084851.1-201ENST00000529105 249 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AP005435.4-201ENST00000529514 284 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC087276.1-201ENST00000529659 480 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC074050.1-201ENST00000563247 211 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC016542.1-201ENST00000608259 493 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 STMN1P1-201ENST00000617809 440 ntBASIC1.43□□□□□ -2.18
COMMD3Q9UBI1 RNU6-543P-201ENST00000362576 108 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC019129.1-201ENST00000403786 261 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 TAAR7P-201ENST00000436141 242 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 MTND1P33-201ENST00000446251 917 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AL121769.1-201ENST00000469473 401 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC023790.1-201ENST00000482174 347 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC096745.1-201ENST00000509945 370 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC091965.2-201ENST00000512324 613 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 RNU6-1282P-201ENST00000516735 96 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 HIGD1AP6-201ENST00000521833 279 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC074051.3-201ENST00000570238 358 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 MIR4287-201ENST00000579398 78 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 uc_338.5-201ENST00000611839 155 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 NUP58P1-201ENST00000502546 1738 ntBASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.42□□□□□ -2.18
COMMD3Q9UBI1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC004520.1-201ENST00000608362 1413 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 ELF2P3-201ENST00000445099 1506 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 OR1L1-202ENST00000373686 1083 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 RNU1-148P-201ENST00000384472 162 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AL035405.1-201ENST00000400795 710 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AL512604.1-201ENST00000404812 257 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 RN7SKP101-201ENST00000411376 320 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 Z85995.1-201ENST00000415547 335 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AL500527.1-201ENST00000448532 255 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 MTCO1P42-201ENST00000457379 726 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC140059.1-201ENST00000489238 361 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 RNU5A-7P-201ENST00000515979 116 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 RNU6-27P-201ENST00000516146 107 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC010186.2-204ENST00000537668 439 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 CBX3P2-202ENST00000583365 535 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AC105224.1-201ENST00000587055 421 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AL137246.1-201ENST00000607072 977 ntBASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.41□□□□□ -2.18
COMMD3Q9UBI1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 SNORD82-201ENST00000365530 70 ntBASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 MCTS2P-201ENST00000394552 546 ntBASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 RPP40P1-201ENST00000426762 456 ntBASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 AL512844.2-201ENST00000433990 593 ntBASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 AC087884.1-201ENST00000469738 328 ntBASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 AL049873.1-201ENST00000480540 376 ntBASIC1.4□□□□□ -2.19
COMMD3Q9UBI1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms