Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 Y_RNA.151-201ENST00000363566 112 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 RNU6-288P-201ENST00000363690 104 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 Y_RNA.314-201ENST00000365114 102 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 RNU6-398P-201ENST00000384143 109 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 RNU6-713P-201ENST00000384761 107 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 Y_RNA.577-201ENST00000384794 101 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTN3Q9P232 RNU4-78P-201ENST00000410940 126 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 BX842559.1-201ENST00000419615 532 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 MRPS18CP6-201ENST00000423587 223 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC073910.1-201ENST00000445047 438 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 FTH1P25-201ENST00000447665 469 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC010326.1-201ENST00000462726 602 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC008897.1-201ENST00000494006 347 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC093852.1-201ENST00000503587 266 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC108145.1-201ENST00000503770 153 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 RNU2-53P-201ENST00000516257 147 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC109446.1-201ENST00000566172 220 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AL109918.3-201ENST00000603072 338 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 ELOCP5-201ENST00000604924 333 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 MIR6748-201ENST00000610433 71 ntBASIC5.17□□□□□ -1.58
CNTN3Q9P232 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CNTN3Q9P232 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CNTN3Q9P232 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CNTN3Q9P232 AC026523.2-201ENST00000625039 7739 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 ZFRP1-201ENST00000457579 2970 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 AL136964.1-201ENST00000622038 2990 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CNTN3Q9P232 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 AL590240.1-201ENST00000334118 313 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 Y_RNA.106-201ENST00000363189 100 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 RNU6-263P-201ENST00000363811 107 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 Y_RNA.210-201ENST00000364161 110 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 SNORA56-201ENST00000383966 129 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 RNU6-1026P-201ENST00000384465 108 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 RPL21P90-201ENST00000415692 466 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 AC245028.1-201ENST00000423259 256 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CNTN3Q9P232 snoU13.3-201ENST00000459441 104 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 FTH1P2-201ENST00000466086 412 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 AC114801.2-201ENST00000503825 781 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 HMGB3P16-201ENST00000508037 287 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 AC105129.1-201ENST00000560250 297 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 AC093249.4-201ENST00000564755 259 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 AC084783.1-201ENST00000565846 910 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 MIR15A-201ENST00000607334 83 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 AL591516.1-201ENST00000611326 274 ntBASIC5.16□□□□□ -1.58
CNTN3Q9P232 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CNTN3Q9P232 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTN3Q9P232 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CNTN3Q9P232 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
CNTN3Q9P232 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
CNTN3Q9P232 AC005183.1-201ENST00000603687 1979 ntBASIC5.15□□□□□ -1.58
CNTN3Q9P232 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CNTN3Q9P232 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.15□□□□□ -1.58
CNTN3Q9P232 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.15□□□□□ -1.58
CNTN3Q9P232 RNU6-1249P-201ENST00000363237 111 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 RNA5SP505-201ENST00000364748 108 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CNTN3Q9P232 Y_RNA.447-201ENST00000384184 113 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 RPS16P5-201ENST00000406501 404 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 HSPE1P8-201ENST00000406997 288 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 MIR1271-201ENST00000408537 86 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 RNU6-712P-201ENST00000410558 100 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 RPL7AP73-201ENST00000413490 353 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 RPS12P23-201ENST00000419579 400 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 RPS15AP10-201ENST00000432472 382 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 DAP3P1-201ENST00000441522 278 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 DYNLT3P2-201ENST00000442517 295 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 PRDX3P3-201ENST00000447765 522 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.15□□□□□ -1.59
CNTN3Q9P232 RPL12P20-201ENST00000475538 479 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 RNU6-1143P-201ENST00000516125 104 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 RNU6-840P-201ENST00000517275 65 ntBASIC5.15□□□□□ -1.59
CNTN3Q9P232 AF186190.1-201ENST00000517470 480 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms