Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL096803.2-201ENST00000450032 677 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 SNORA48.10-201ENST00000516965 160 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AC023813.2-201ENST00000564321 469 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AC015720.1-201ENST00000565251 277 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 MIR4713-201ENST00000582691 75 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 CBX3P2-202ENST00000583365 535 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 BNIP3P25-201ENST00000596023 559 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL713998.2-201ENST00000604538 1198 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AC021646.1-201ENST00000605469 484 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 RNU6-263P-201ENST00000363811 107 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 TXNP7-201ENST00000406296 293 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 PTENP1-201ENST00000447117 1215 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 MTCYBP18-201ENST00000501056 747 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 SCARNA11.3-201ENST00000517276 130 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AP003033.1-201ENST00000527244 415 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AC024619.4-201ENST00000580924 316 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AC091834.1-201ENST00000614543 472 ntBASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
SMCO4Q9NRQ5 AC010329.5-201ENST00000623497 2174 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 MIR23B-201ENST00000384832 97 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 RPL23AP36-201ENST00000413895 458 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AL358453.1-201ENST00000422522 250 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 RPS29P29-201ENST00000456396 171 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 RNU1-123P-201ENST00000458950 160 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC008379.1-201ENST00000463655 464 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 RPS27P23-201ENST00000487608 251 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 RNU6-362P-201ENST00000516736 90 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC010186.2-204ENST00000537668 439 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 MIR4295-201ENST00000585286 85 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC128687.1-201ENST00000605304 619 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC090132.2-201ENST00000615881 347 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC091925.2-201ENST00000625059 256 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 AC097655.1-201ENST00000635075 318 ntBASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.91□□□□□ -2.26
SMCO4Q9NRQ5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
SMCO4Q9NRQ5 RNA5SP125-201ENST00000364843 120 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 OR6C66P-201ENST00000414917 930 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 MTCO3P4-201ENST00000419236 787 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 AL109913.1-201ENST00000421173 514 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 UBE2D3P1-201ENST00000436669 444 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 RPL23AP76-201ENST00000441860 458 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 AC109464.2-201ENST00000510242 943 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 AC097372.4-201ENST00000625025 466 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 IGHVIII-44-202ENST00000636235 289 ntBASIC0.9□□□□□ -2.27
SMCO4Q9NRQ5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 RNU4-78P-201ENST00000410940 126 ntBASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 RN7SKP192-201ENST00000411291 327 ntBASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 PIGPP2-201ENST00000411569 458 ntBASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 PAICSP7-201ENST00000419829 962 ntBASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 EZH2P1-201ENST00000431167 291 ntBASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 NDUFB4P6-201ENST00000436819 366 ntBASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 AL714022.1-201ENST00000439897 151 ntBASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.89□□□□□ -2.27
SMCO4Q9NRQ5 RPL39P29-201ENST00000447779 157 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms