Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 HMGB1P49-201ENST00000418882 569 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AL451074.3-201ENST00000437709 472 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 MTCYBP42-201ENST00000444653 1130 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 NUTF2P7-201ENST00000453086 375 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 MTATP6P7-201ENST00000453315 681 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 BX322784.1-201ENST00000455793 1077 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 RNU7-136P-201ENST00000458819 69 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 KLF3P2-201ENST00000465138 268 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 DYNLL1P5-201ENST00000467158 270 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 MTCYBP16-201ENST00000509187 1129 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC034159.1-201ENST00000513885 583 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 RNU6-583P-201ENST00000516012 92 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 RNU1-45P-201ENST00000517191 141 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC087897.1-201ENST00000550134 156 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AL359212.1-201ENST00000556608 614 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AL589743.7-201ENST00000612637 233 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC024257.5-201ENST00000612739 531 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC109454.4-201ENST00000623411 649 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC012640.5-201ENST00000623897 319 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 MIR4275-201ENST00000636486 87 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AL138713.1-201ENST00000624026 2130 ntBASIC2.11□□□□□ -2.07
VCX3AQ9NNX9 AC010329.5-201ENST00000623497 2174 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 ANKRD36P1-201ENST00000344424 659 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 RNU6-236P-201ENST00000363886 106 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AC068533.2-201ENST00000411872 306 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AL592148.1-201ENST00000413568 445 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AL807761.1-201ENST00000417622 171 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 RPL36AP36-201ENST00000418616 301 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 HMGB1P9-201ENST00000429856 646 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 ARF4P4-201ENST00000439608 520 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 OSTCP8-201ENST00000445117 448 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AC097493.1-201ENST00000463958 372 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 RPL31P50-201ENST00000471002 296 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 RPS29P26-201ENST00000477483 171 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 WBP1LP4-201ENST00000505043 344 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 HIGD1AP13-201ENST00000509878 289 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AP003355.1-201ENST00000518956 587 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 MIR3199-1-201ENST00000582434 88 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AL390838.2-201ENST00000602394 274 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AC008121.1-201ENST00000603244 268 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AL445264.1-201ENST00000621719 171 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AC039056.2-201ENST00000622261 511 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 AC069528.2-201ENST00000624849 1991 ntBASIC2.1□□□□□ -2.07
VCX3AQ9NNX9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 MIR218-1-201ENST00000384999 110 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 MIR27B-201ENST00000385129 97 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 SNORA46.1-201ENST00000391069 153 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AL451054.2-201ENST00000420896 202 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 BPY2DP-201ENST00000422208 265 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 MED14P1-201ENST00000430517 648 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 PTGES3P1-201ENST00000439531 483 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 RN7SL807P-201ENST00000470923 297 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC006499.2-201ENST00000513470 337 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC022447.1-201ENST00000515358 464 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 RNU6-1225P-201ENST00000516336 65 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AP003497.1-201ENST00000528472 562 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC118942.1-201ENST00000529674 1035 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC010186.2-204ENST00000537668 439 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 MIR3160-1-201ENST00000577972 85 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 MIR5571-201ENST00000577998 113 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC002545.1-201ENST00000592511 181 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 ELOCP35-201ENST00000604289 336 ntBASIC2.09□□□□□ -2.07
VCX3AQ9NNX9 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms