Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 RNU5E-10P-201ENST00000363506 118 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 RNA5SP68-201ENST00000363885 119 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 RNU6-1122P-201ENST00000384449 107 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL512633.1-201ENST00000399931 655 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 HMGB1P17-201ENST00000403495 628 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC092047.1-201ENST00000424997 240 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 MTCYBP45-201ENST00000435243 565 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 NANOGP2-201ENST00000435391 727 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 GTF2IP7-202ENST00000436677 309 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 OR10R1P-201ENST00000441524 1141 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 RPL7P36-201ENST00000444633 681 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 CBWD4P-201ENST00000445695 655 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 DPPA3P1-201ENST00000448050 469 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 EXOSC3P1-201ENST00000448649 500 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC079203.1-201ENST00000487972 404 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC114786.4-201ENST00000508771 728 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC114797.1-201ENST00000514003 728 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 RNU6-840P-201ENST00000517275 65 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC087808.1-201ENST00000520501 361 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC004486.1-201ENST00000546846 233 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC007954.1-201ENST00000554198 494 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL132857.1-201ENST00000555180 708 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL355836.1-201ENST00000555951 870 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC087465.1-201ENST00000560574 245 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC009163.5-201ENST00000575421 637 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 MIR3912-201ENST00000577566 105 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 BNIP3P39-201ENST00000601077 554 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC091057.3-201ENST00000602684 733 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL390208.1-201ENST00000605885 644 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AL391834.2-201ENST00000609982 546 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 MIR6817-201ENST00000615588 66 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 AC002550.2-201ENST00000621246 394 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 PABPC1P9-201ENST00000426076 1612 ntBASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.71□□□□□ -1.98
TM9SF3Q9HD45 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 XGY1-201ENST00000381172 446 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 MYL8P-204ENST00000431574 518 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 BNIP3P2-201ENST00000441221 577 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 RPS3P1-201ENST00000456781 192 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 RPS20P20-201ENST00000460498 340 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC069528.1-202ENST00000482888 637 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 RN7SKP31-201ENST00000516354 278 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC022634.1-201ENST00000520765 532 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 ZNF861P-201ENST00000588126 639 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AL139022.2-201ENST00000606934 443 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC013476.2-201ENST00000614456 459 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AL121895.2-201ENST00000619558 447 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 MIR7515-201ENST00000637837 67 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AC006378.2-201ENST00000623178 2476 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 AL161431.1-201ENST00000618966 4205 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.7□□□□□ -1.98
TM9SF3Q9HD45 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 RN7SKP226-201ENST00000364912 300 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 DHFRP6-201ENST00000401776 268 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL096701.2-201ENST00000416920 238 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 HMGB1P49-201ENST00000418882 569 ntBASIC2.69□□□□□ -1.98
TM9SF3Q9HD45 AC007435.1-201ENST00000421086 415 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms