Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC114797.1-201ENST00000514003 728 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RN7SKP83-201ENST00000516512 178 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RNA5SP164-201ENST00000516533 110 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RNU6-64P-201ENST00000517119 105 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AL121579.1-201ENST00000555129 305 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC012182.1-201ENST00000570133 895 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC098848.2-201ENST00000588023 330 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 BNIP3P30-201ENST00000601184 574 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 Z84480.1-201ENST00000605131 311 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AL020991.1-201ENST00000612314 373 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC084757.4-201ENST00000616350 526 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AC244100.1-202ENST00000621554 382 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 FP236240.3-201ENST00000623061 327 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 AL136313.1-201ENST00000624804 202 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 FER-210ENST00000628534 558 ntTSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 PRO1804-201ENST00000623780 2050 ntBASIC3.85□□□□□ -1.79
USP29Q9HBJ7 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP29Q9HBJ7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNA5SP124-201ENST00000362739 110 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNU6-335P-201ENST00000364563 113 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL391417.1-201ENST00000404100 426 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL139413.1-201ENST00000421309 217 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL139247.1-201ENST00000422768 325 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL606489.2-201ENST00000433886 234 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RPL35AP22-201ENST00000436855 335 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 HMGB3P12-201ENST00000438745 556 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNU7-170P-201ENST00000459303 61 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AC078918.1-201ENST00000498515 228 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNU1-95P-201ENST00000516357 160 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNU1-128P-201ENST00000516704 160 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNU6-410P-201ENST00000517006 107 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AC008489.1-201ENST00000524271 483 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 CBX3P5-201ENST00000552017 521 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL121576.1-201ENST00000556055 276 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 HMGB1P6-201ENST00000569046 646 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL162413.1-201ENST00000603198 110 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 RNU1-30P-201ENST00000606575 163 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 TUG1_1.1-201ENST00000610654 145 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 MIR6130-201ENST00000619419 109 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP29Q9HBJ7 AL157700.1-201ENST00000561973 1432 ntBASIC3.84□□□□□ -1.79
USP29Q9HBJ7 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
USP29Q9HBJ7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 HSPE1P11-201ENST00000339579 310 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 MIR558-201ENST00000384920 94 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 RNU6-278P-201ENST00000390945 109 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 RNA5SP424-201ENST00000390988 115 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 RNU2-9P-201ENST00000410194 145 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 MRPL50P2-201ENST00000416821 482 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AL159169.1-201ENST00000421119 127 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 GTF2IP20-201ENST00000431663 360 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 RPS20P5-201ENST00000434808 360 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC022364.2-201ENST00000457963 554 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 HMGN1P11-201ENST00000508668 303 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC005921.1-201ENST00000510589 286 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 SNORD27.1-201ENST00000516319 72 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 SNORA40.12-201ENST00000516329 111 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 SNORA20.3-201ENST00000516880 132 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC103783.1-201ENST00000520506 373 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC011979.2-201ENST00000527568 352 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 ARL2BPP2-201ENST00000550907 489 ntBASIC3.83□□□□□ -1.8
USP29Q9HBJ7 AC126177.3-201ENST00000551839 688 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms