Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 UBE2V1P13-201ENST00000436983 439 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AL138799.3-201ENST00000438968 350 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS11Q9H270 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS11Q9H270 ELOCP24-201ENST00000456370 334 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AP1S2P1-201ENST00000457344 379 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 RPS3AP41-201ENST00000462701 778 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 RN7SL329P-201ENST00000467740 299 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AC011005.3-201ENST00000491624 395 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS11Q9H270 AC005921.1-201ENST00000510589 286 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS11Q9H270 RNU6-864P-201ENST00000516256 108 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 RNU6-406P-201ENST00000516470 107 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 SNORA31.20-201ENST00000517111 133 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS11Q9H270 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS11Q9H270 AP000676.2-201ENST00000529711 301 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 OR4R1P-201ENST00000529879 463 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS11Q9H270 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS11Q9H270 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS11Q9H270 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS11Q9H270 AC005357.1-201ENST00000588399 301 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS11Q9H270 MTND5P19-201ENST00000424872 1794 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS11Q9H270 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS11Q9H270 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS11Q9H270 TAB3P1-202ENST00000452645 1634 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
VPS11Q9H270 ZNF807-201ENST00000328088 1707 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS11Q9H270 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS11Q9H270 Y_RNA.135-201ENST00000363439 95 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RNU6-1188P-201ENST00000363795 107 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 U3.12-201ENST00000364498 214 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RNU6-1032P-201ENST00000384100 107 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RNU6-209P-201ENST00000384118 107 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RNU6-1181P-201ENST00000384191 106 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 SNORD3H-201ENST00000384486 214 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 U3.20-201ENST00000390909 217 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RN7SKP158-201ENST00000410453 326 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC016769.2-201ENST00000414815 475 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 TOMM22P1-201ENST00000418578 312 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS11Q9H270 HMGB1P12-201ENST00000438594 598 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AL035666.1-201ENST00000446195 348 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS11Q9H270 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS11Q9H270 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS11Q9H270 GMFBP1-201ENST00000467831 427 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RPL12P20-201ENST00000475538 479 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC068781.1-201ENST00000488231 618 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS11Q9H270 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS11Q9H270 MTCYBP40-201ENST00000509390 1135 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC004062.1-201ENST00000509926 645 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC098591.2-201ENST00000510152 315 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RNU4-29P-201ENST00000515943 174 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS11Q9H270 RANP9-201ENST00000519957 271 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS11Q9H270 AP001781.1-201ENST00000530977 207 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS11Q9H270 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS11Q9H270 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.36□□□□□ -1.71
VPS11Q9H270 OR4T1P-201ENST00000554933 911 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.36□□□□□ -1.71
VPS11Q9H270 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.36□□□□□ -1.71
VPS11Q9H270 AC025946.2-201ENST00000603398 234 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AL670379.11-201ENST00000604059 253 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.36□□□□□ -1.71
VPS11Q9H270 AL670379.10-201ENST00000604330 253 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AL670379.12-201ENST00000605291 253 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AL670379.9-201ENST00000605428 253 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 AC012603.1-201ENST00000606424 528 ntBASIC4.36□□□□□ -1.71
VPS11Q9H270 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS11Q9H270 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VPS11Q9H270 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VPS11Q9H270 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VPS11Q9H270 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS11Q9H270 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS11Q9H270 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
VPS11Q9H270 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS11Q9H270 RNU6-1115P-201ENST00000362490 106 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
VPS11Q9H270 RNU6-38P-201ENST00000384085 107 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VPS11Q9H270 RNU11-4P-201ENST00000391149 133 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 SNORD66.1-201ENST00000391230 76 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 RNU4-26P-201ENST00000410270 107 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.35□□□□□ -1.71
VPS11Q9H270 AC018865.2-201ENST00000423631 129 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC068287.1-201ENST00000430283 295 ntBASIC4.35□□□□□ -1.71
VPS11Q9H270 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS11Q9H270 PRPS1P1-201ENST00000445305 876 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms