Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 AL159972.1-201ENST00000625150 448 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDT1Q9H211 USP8P1-201ENST00000494673 3183 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 FARSBP1-201ENST00000435808 1778 ntBASIC3.68□□□□□ -1.82
CDT1Q9H211 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDT1Q9H211 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.68□□□□□ -1.82
CDT1Q9H211 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 MTND5P1-201ENST00000445440 1375 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.67□□□□□ -1.82
CDT1Q9H211 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 RNU6-694P-201ENST00000364071 147 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 MTCO3P40-201ENST00000392516 676 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.67□□□□□ -1.82
CDT1Q9H211 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.67□□□□□ -1.82
CDT1Q9H211 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.67□□□□□ -1.82
CDT1Q9H211 OR4K11P-201ENST00000431829 904 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.67□□□□□ -1.82
CDT1Q9H211 RABEPKP1-201ENST00000440529 1026 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 RAC1P7-201ENST00000445367 377 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.67□□□□□ -1.82
CDT1Q9H211 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 AC020893.1-201ENST00000502452 580 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC019235.1-201ENST00000503847 207 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 PRDX4P1-201ENST00000507189 574 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.67□□□□□ -1.82
CDT1Q9H211 AC009646.1-201ENST00000510455 318 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.67□□□□□ -1.82
CDT1Q9H211 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.67□□□□□ -1.82
CDT1Q9H211 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.67□□□□□ -1.82
CDT1Q9H211 RNU6-1095P-201ENST00000516148 108 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.67□□□□□ -1.82
CDT1Q9H211 AC107934.1-201ENST00000522215 217 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.67□□□□□ -1.82
CDT1Q9H211 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.67□□□□□ -1.82
CDT1Q9H211 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.67□□□□□ -1.82
CDT1Q9H211 SNORA59B-202ENST00000578183 701 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 MIR3682-201ENST00000581338 84 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC121334.2-201ENST00000605387 271 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC092794.2-201ENST00000620933 563 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC009268.2-201ENST00000621925 457 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 AC091953.2-201ENST00000623979 160 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 PISRT1-201ENST00000626175 531 ntBASIC3.67□□□□□ -1.82
CDT1Q9H211 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDT1Q9H211 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.67□□□□□ -1.82
CDT1Q9H211 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CDT1Q9H211 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDT1Q9H211 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDT1Q9H211 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDT1Q9H211 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDT1Q9H211 RNU6-1078P-201ENST00000364522 103 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 RNU6-629P-201ENST00000384061 103 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 MIR607-201ENST00000385241 96 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 HSPE1P26-201ENST00000405341 275 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 GSTA9P-201ENST00000406231 611 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AL590002.1-201ENST00000406554 418 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 MIR1277-201ENST00000408536 78 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.66□□□□□ -1.82
CDT1Q9H211 CCDC58P2-201ENST00000417131 366 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AC233728.2-201ENST00000425348 757 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.66□□□□□ -1.82
CDT1Q9H211 FTH1P1-201ENST00000437933 532 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 PSPHP1-201ENST00000450062 261 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 RPL31P13-201ENST00000484151 370 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.66□□□□□ -1.82
CDT1Q9H211 Y_RNA.704-201ENST00000516851 102 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AL121579.1-201ENST00000555129 305 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.66□□□□□ -1.82
CDT1Q9H211 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.66□□□□□ -1.82
CDT1Q9H211 BX664608.1-201ENST00000610519 487 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AC091953.5-201ENST00000622919 233 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AC022140.2-201ENST00000623500 188 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 AL008636.1-201ENST00000625038 1018 ntBASIC3.66□□□□□ -1.82
CDT1Q9H211 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.66□□□□□ -1.82
CDT1Q9H211 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDT1Q9H211 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CDT1Q9H211 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CDT1Q9H211 AF127577.6-201ENST00000623352 2191 ntBASIC3.65□□□□□ -1.82
CDT1Q9H211 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDT1Q9H211 Y_RNA.70-201ENST00000362886 110 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 SNORA7.2-201ENST00000364446 145 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 RNY4P16-201ENST00000364768 94 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 MIR135A2-201ENST00000384854 100 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 MRPL42P2-201ENST00000403169 426 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 RNA5SP120-201ENST00000410900 112 ntBASIC3.65□□□□□ -1.83
CDT1Q9H211 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.65□□□□□ -1.83
CDT1Q9H211 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms